Gene Pcryo_0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0946 
Symbol 
ID4035938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1124933 
End bp1125934 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content37% 
IMG OID637973409 
Producthypothetical protein 
Protein accessionYP_580211 
Protein GI93005774 
COG category[S] Function unknown 
COG ID[COG4886] Leucine-rich repeat (LRR) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000225711 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGATAACAA ACAATACTAC TACTGCAAAA CCATGGATGT CAGAGCTGTG GACATGGGCC 
GATGAGTATG GGATTTCTGA AAAGGATTTA CCACGAAACG AAGCGCATCT ATTGACGATA
ACAGAATTGG AGATCTGCTC TGACCAGATT ACTGAGCTGC CTGAAAGTAT TGGTTACTTA
CACAACCTAA CCCATTTAGC CCTAAACTGC AAAGCGCTTG AACGTTTGCC AGAGTCTATA
GGTCAATTAA GTCAGTTAGA GCGATTGACG ATTACTAGTG ATGAGGTTAA GCAACTTCCT
GAGAGCTTTG CTAGGCTAAT CAGTTTGAGT TCGCTAAATA TTCCTACTCA CTTAAGCAAT
CAGCTACCCA CGACTCTTAT GGATAAGTAT CATAATGAAA ATGAAACGTT ATATATAGAG
CGTATGGCTT TCACTTCGTT ATATAGCCCC TTGGAAAAGA ATTATGGCTT ATCCTTTTTC
GGGTTTGTTC TTATTAGTGA TGATTGGAAT GAAAAAGCAC TAATTGATTT AAAGTTCAAA
GCAGCATTAG AGTTCTTACT CGTTTTGCAA ACCACTGAAC AAACTATTGA TGATTTTGAT
GTGGTGGATG GCGTGATCAT TTGCAAGCCT GATGAAGTAC AAAAAATAAT AAATATGTTT
GAAACTACTT TCGACTATTC TGTGATGGCT ATAGACTTTG GAGATGTTAG AGAAGCAATA
AATTTTGCGA AACCTGCTAA ATTTATACAA GCTAGTGCAT TAGAAGTGTC TGAATCAGAC
AAAGTATTTA GTCAGATTAT TGATCAAATT CCTAAAGAGA TAACCGTAAA ATCTGTGATG
TTTCAAGTGG AAAGTAACCG TTATTTTACA GTGGATGAGT TCAAAGTTAT GTCAGATACT
ATTGATAATA TGGGTGCAGA GGATGAACAT ATTTTCTATA GTGCAAAAGT TGTCGATAAG
CCTGAGCACT GTTGGATGGG TATGATATAT ATGGTTGGGT AA
 
Protein sequence
MITNNTTTAK PWMSELWTWA DEYGISEKDL PRNEAHLLTI TELEICSDQI TELPESIGYL 
HNLTHLALNC KALERLPESI GQLSQLERLT ITSDEVKQLP ESFARLISLS SLNIPTHLSN
QLPTTLMDKY HNENETLYIE RMAFTSLYSP LEKNYGLSFF GFVLISDDWN EKALIDLKFK
AALEFLLVLQ TTEQTIDDFD VVDGVIICKP DEVQKIINMF ETTFDYSVMA IDFGDVREAI
NFAKPAKFIQ ASALEVSESD KVFSQIIDQI PKEITVKSVM FQVESNRYFT VDEFKVMSDT
IDNMGAEDEH IFYSAKVVDK PEHCWMGMIY MVG