| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0875 |
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| Symbol | |
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| ID | 4035311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 1035779 |
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| End bp | 1037824 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637973338 |
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| Product | choline/carnitine/betaine transport |
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| Protein accession | YP_580140 |
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| Protein GI | 93005703 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAGCT CGCCATCAAA GGATGCGACG AAACCCCTGA CTCTAAATAA GACGGTTTTT
TTAGGTTCAG CTATTATTTC TATTTTATTG ATAATCTGGA CGATTGCGTT TCCAGATTAT
AGTGAGGCAT TATTAAGTTC AAGTATGGCA TGGGTATCAG AGAGTTTTGG CTGGTATTAC
ATGCTGGTGG TTGCCGCGTA TAGTATATTT GCCTTGTTTG TTGGCTTTTC TAAGTATGGC
GATATTAAGC TTGGTCAAGA TCATGAAAAG GCGCAATTTC CCTTTTTAGC GTGGGCAGCG
ATGCTGTTCT CCGCTGGTAT CGGCATTGAT TTATTGTTTT TTGGTGCGTC TGAGCCGTTG
ATGCATTATC TGACGCCGCA TACGGGGCTC GAGCCTGCCA GTGAGGCGGC TATGCGTGAA
GCACTTGCGC AGACCTTTTT ACATTGGGGT CTACATGGCT GGGGCATTTA TGCTTTAATC
GGGATGGCAT TGGCGTACTT TGCTTATCGT AAAAACATGC CACTCGCGTT ACGTTCACCA
CTGACGCCTA TCTTTGGCGA GCGCTTAATT AAAGGCTGGC TTGGTGATGG TATTGATACC
TTTGGTGTGG TTTGTACCTT GATGGGTATC GCGACCAGTT TGGGTATTGG TGTATTGCAA
GCCAATGCTG GTTTGACTCA TGTTTTTGGG ATTGAATCCA GCAAAATGGT TCAAACCTTT
ATCATCATAG GTGTTGTCGC TGCCGCGGCG ATCTCTGCGA TGACTGGTGT AGAAAGAGGC
GTCCGCCGTT TATCCGAATT TAATATGCTA TCTTCGATAT TGCTATTAAT CGCGATATTG
GTGATGGGTA ACACGGTTTA TTTGCTGAAT ACCTTTACCC AAAATATTGG TCAATACTTC
CAAACCATCG TTTTCAAAAC CTTTGATGTT TATGCTTATG ATGGTCAAGC TGGCGCTGAT
TGGAAATCAG GCTGGACGAT ATTTTTCTGG GCATGGTGGG TCGCTTGGGC ACCGTTTGTA
GGCCTATTTA TTGCGCGTAT TAGCCGTGGT CGTACCCTGC GTGAGTTCGT ATTTGGTGTG
ATGTTTATCC CACTTGGATT CATCTTTGCT TGGTTCTCTA TCTTTGGTAA CTCAGCGATA
GATTTGGTTG CCAATGGTGC CACTGAACTT GGTGAAATCG CAGTCAATGA TGCGGCAATG
GGCATGTTTG CCTTGTTTGA GTATTTTCCT TACAGCGAAG TGCTATCATT TGCAGGTGTG
GTTATCGGGT TAGTATTCTT TGTGACTTCA GCTGACTCAG GCGCGTTAGT ATTAGCAAAC
TTGAGCTCAC GCGGCATGAC CAATGATACG GACGCACCTG TTTGGTTACG CTTATTTTGG
GCAGCAGCGA CCGGTCTTAT TACCCTAGGC TTATTGTTTG CTGGTGGTTT TGCCTCATTA
CAGTCAGTAT CCGTCATTGC AGGTTTGCCG TTCTCTCTTA TCCTTGTACT CTATATGATG
TCGATGTGGA AGTCGTTAAA AGAGGAAGGT AATAAGCGTA AAGCCAGTAC GATTGGTACG
GCTAATGTGC TTGATAGTGG TAAAAGCTGG AAAGCACGCT TGCAACGTAT CGTCAGTTTC
CCAAGCCATG CACAAGTTGA ACGGTTTTTA CAAAATGTGG TCAGACCTGC CATGACGGAA
GTTGAAAAAG AGTTTGCGGC AGGCGGTCTA AAGACGTCTT TGGATATCCG TAACCCTGAA
CATATCGGAC AAGATATAGA TGAAGGCATG GATGAGAGTA GCGGTCAAAT AGATGGTCTC
AAATTGCGCG TCGGACATGG CGATGAAGAT GACTTTATTT ATGAAGTTAA TTTGATCAAA
GCGGAGCGTC CTAACTTTAC ATTGAGCACC TCAACTAAGA ACGCAGAGTA CTATTATCGT
GCGGAAGTGT TCTTAAGTGA AGGCTCGCAA GAGTATGACT TGGTTGGTTA CTCCAAAGAG
CAAGTGTTGG TCGATATCTT AAATCAGTAC GAGCGCCATT TGCAGTATCT ACATTTAGAG
CGTTAA
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| Protein sequence | MYSSPSKDAT KPLTLNKTVF LGSAIISILL IIWTIAFPDY SEALLSSSMA WVSESFGWYY
MLVVAAYSIF ALFVGFSKYG DIKLGQDHEK AQFPFLAWAA MLFSAGIGID LLFFGASEPL
MHYLTPHTGL EPASEAAMRE ALAQTFLHWG LHGWGIYALI GMALAYFAYR KNMPLALRSP
LTPIFGERLI KGWLGDGIDT FGVVCTLMGI ATSLGIGVLQ ANAGLTHVFG IESSKMVQTF
IIIGVVAAAA ISAMTGVERG VRRLSEFNML SSILLLIAIL VMGNTVYLLN TFTQNIGQYF
QTIVFKTFDV YAYDGQAGAD WKSGWTIFFW AWWVAWAPFV GLFIARISRG RTLREFVFGV
MFIPLGFIFA WFSIFGNSAI DLVANGATEL GEIAVNDAAM GMFALFEYFP YSEVLSFAGV
VIGLVFFVTS ADSGALVLAN LSSRGMTNDT DAPVWLRLFW AAATGLITLG LLFAGGFASL
QSVSVIAGLP FSLILVLYMM SMWKSLKEEG NKRKASTIGT ANVLDSGKSW KARLQRIVSF
PSHAQVERFL QNVVRPAMTE VEKEFAAGGL KTSLDIRNPE HIGQDIDEGM DESSGQIDGL
KLRVGHGDED DFIYEVNLIK AERPNFTLST STKNAEYYYR AEVFLSEGSQ EYDLVGYSKE
QVLVDILNQY ERHLQYLHLE R
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