Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0801 |
Symbol | |
ID | 4033746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 943595 |
End bp | 944737 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637973266 |
Product | 3'-5' exonuclease |
Protein accession | YP_580068 |
Protein GI | 93005631 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.963723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTAAGC AAAGCCAGTT GGATGAAGTG ATTGAGGCAT TGACCACTTG CGGGCGTGTG GCATTAGATA CCGAGTTTAT CAAGCGCGAT ACCTATTATC CACGCTTAGC ACTGATACAG CTAAATACTG GCAATCATGT ATATTTATTA GATGCGCCGC AGTTACAACT GAGTGAGCTA TGGCAAGCAC TTATGAAAGT TGATGTGGCT ATCTGGCATG CTTGTGGTGA AGATTTAGGT ATATTTTATC TATTGTCCGG CTGCCCGCCA CTGACCAATA TTTTTGATAC GCAAATTGCC TTGTCCTACT TAACAGGTCA ATTACAGATG GGTTATCAGC AGGCGCTTGA TGAACAGCTC GATATGCATA TTGATAAGGA ACAAAGCCAG TCAGATTGGT TACAGCGACC ATTATCAGAT GAGCAAGAGC AATATGCGAT TGATGATGTG CGCTTTTTAC CTGCGTTATA TTTGAGTCTT GAATACGCCC TAAAATCTCA AGGTCTCTAT GAGTATGTCT GGGAAGACTG TCAGCTTTAC GCCAACGACT TATATGATGC TCAAAATGTT GCAGACGAGC AGATGTATCT AACCATGGCA GATTATCGCT ATACCTCTGA GCAAATGGCA ATATTGCAGG CGGTAGCCAC ATGGCGTGAA GAGCTAGCGC GCTCAACCAA TCAGCCCCGT ACTTTTGTCA TAAAAAAACA AGCCGTGCGT GAGATTATCA CTGAAAAACC AAACACGATG CGTGAGCTTG CGCATAAGAC AACGATACAT CGCAGTATGT TGCGACTGTA TGGTGAAGAA TTACTCAAAG TGATAAAGGA AGCAAAAAAT CTGCATCCTG CAGAATATCC AGATTCTCTA TTGCCGCCGT ATCGCTCAAA GAATAAAGTA CTCTCAAAAG CGGTACAAAA AACGATAGAT GATCAAGCAA AAGCTACCGG CGTACCCGCT AATGTCTTGA TGCGTAAAAA ATGGCTTGGG CAATTATATG AAGTGATTGC TTTTGATAAA GATATTAGCG AGTTGCCGCA AGGGTTGAAA GGCTGGCGTC ATGATTGGGT AATGCACACC TTTATTCCCG TTATCGAAGC GCATAAAACC GAGCTACAGC AAGGCATGGG TATCAATGTA TAG
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Protein sequence | MRKQSQLDEV IEALTTCGRV ALDTEFIKRD TYYPRLALIQ LNTGNHVYLL DAPQLQLSEL WQALMKVDVA IWHACGEDLG IFYLLSGCPP LTNIFDTQIA LSYLTGQLQM GYQQALDEQL DMHIDKEQSQ SDWLQRPLSD EQEQYAIDDV RFLPALYLSL EYALKSQGLY EYVWEDCQLY ANDLYDAQNV ADEQMYLTMA DYRYTSEQMA ILQAVATWRE ELARSTNQPR TFVIKKQAVR EIITEKPNTM RELAHKTTIH RSMLRLYGEE LLKVIKEAKN LHPAEYPDSL LPPYRSKNKV LSKAVQKTID DQAKATGVPA NVLMRKKWLG QLYEVIAFDK DISELPQGLK GWRHDWVMHT FIPVIEAHKT ELQQGMGINV
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