| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0796 |
|---|
| Symbol | |
|---|
| ID | 4033741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 937283 |
|---|
| End bp | 938584 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637973261 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_580063 |
|---|
| Protein GI | 93005626 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCTC GTTCTCAATA TGCACTTATG TCTTCTAAAG ATAAAAATAC GGTACTGTTT
ACTTGCTATA GCAGTGCAAT AGCGTTTTTC GACTTTTTAA TATACCTATA TCTTGCAGAT
ATGTTGGCAG CGACTTTATT TCCTGTTAGC TCAGATCCCA ATCTTATGAA GATACAGGGG
CTGTCATTAT TTGCAATTGG TTATGTGGCA CGCCCACTTG GTGGTGTTAT CTTTGGACGT
TATGGCGATA TAAAAGGTCG TAAACCGTTA TTACTAATCA GTATCTTGAT TACGGCAGCA
AGCTTATTGG CGATGGGATG TTTGCCTACT TATGCACAAT GGGGTTTGGC AGCGCCTGCA
TTGTTTATCG TCTTACGAAT CATACATGGC ATGGCCTATG GTCTTTATGT TCCACTCTCT
TGGGTGTTCG TTGCAGAGCA CGTGCCGCGC CAATATCTGT CAGTAGGCTG TAGCTATGTG
ACTGCCAGTT TTTTTGTGGG TGTTTTATTC TCTAATGGTT TTTTTCTTTG GTTAAGCAGT
ACGTTGACCA CTGAGCAATT GGCAGATTAT GGCTGGCGTT TGCCTTTCTT TATAGCGGCT
ATCCTGACGG TTTTACCGCT CCTTGCCTGG CGATGGATAG AAGAAACCCC GTTTTTCACT
CAGATGAAAA AATCAAGACC TAGTGATTAT GTTGCTAAGC CTTTTACGAC CCTATTTAAG
CATTGCAAGC ATGCTATCTT TATAGGTCTG GTTCTCACTT TAATTGTCTC AAGCATCACC
ACAGTAGTGG TTATTTTATT GCCTGATTTG ATTGAATTAC GCTTTACGCT CGATACTGAC
TTGTTTGGAT TCTCGCACAG TCTTGGCATC GTTTTTATGA TTTTTGGCTG TATTTTTTAT
GGCATCATCT CTAACCATCA AAACTTTGGC AAAATTTTGG CGATAGGCTC TATTATTTTA
ATCGCTCAAA TGCTTGCTTT CTTCTATCAT TTAGAGGCAA GTGGCGACTA TATCCTTATT
ATGTATGCAC TTTTGGGCTT TTGTGCCGGT GTTATCGGCA TGATACCTGC CATCTTGATT
CAACTATTTC CTACCAATGT GCGACTCACC GGAATGGCTT TTTGCTACAA TGTCACTTAT
GGTATCGTTG GGGTGCTAGT ACCATTTGGA CTTGGCTATG CTACTTTATA TGTGAGCTTT
TCACCCGCAC TCTATATCAC TTTCATCGGT TTTATTGCCA TCATCATGGG CATTTATTTT
TATAATCTGC CTGAATTCAA AAAAATCGAT CAGGTCATAT AA
|
|---|
| Protein sequence | MPSRSQYALM SSKDKNTVLF TCYSSAIAFF DFLIYLYLAD MLAATLFPVS SDPNLMKIQG
LSLFAIGYVA RPLGGVIFGR YGDIKGRKPL LLISILITAA SLLAMGCLPT YAQWGLAAPA
LFIVLRIIHG MAYGLYVPLS WVFVAEHVPR QYLSVGCSYV TASFFVGVLF SNGFFLWLSS
TLTTEQLADY GWRLPFFIAA ILTVLPLLAW RWIEETPFFT QMKKSRPSDY VAKPFTTLFK
HCKHAIFIGL VLTLIVSSIT TVVVILLPDL IELRFTLDTD LFGFSHSLGI VFMIFGCIFY
GIISNHQNFG KILAIGSIIL IAQMLAFFYH LEASGDYILI MYALLGFCAG VIGMIPAILI
QLFPTNVRLT GMAFCYNVTY GIVGVLVPFG LGYATLYVSF SPALYITFIG FIAIIMGIYF
YNLPEFKKID QVI
|
|---|
| |