Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0727 |
Symbol | |
ID | 4034130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 856187 |
End bp | 856924 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637973192 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_579994 |
Protein GI | 93005557 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00978147 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGACA CTGCTAAGAA ACAACATATT GTGATCACGG GTGCGACCTC TGGGATTGGT TATCAGCTGG CAAAAGACTA TCTGCGAGAG GGACAGCATG TCTATGCCGT CGGTCGCGAT GAGGAAGCCT TGTCTGAGCT AAAATCATTA GGAGCAGAAA CTGTCGATTT AGATCTAATG GATCGAGATA AGGTGATTGC TGCTTTTGAT AAAATTAATG AGATTGATTT GGCGATTTGC GGCGCTGGCA TGTGTGAGTA TCTAGATATG CCAAACTTTG ATAGCACGGC ATTTATGAAA GTGCTGTCGG TGAATATGGG TACGTTATCG CATGCCATTG AAGCAGTACT GCCAAAGCTG ATTGCTTCAA AAGGACGCTT AGTTGGTATT GGCTCGGCGT CGGCTTACGT GCCTTTTGCT CGTGCAGAGG CTTATGGTAG CTCAAAAGCA GCTATTCACT ATTTAATGAA AACTTTACAG ATTAGCCTTG CACCGCAAGG TGTAGCAGTC AGCTTAGTAG TTCCCGGCTT TGTAGAGACG CCAATGACCA AACAAAACGA TTTTCCGATG CCGTTTTTAC AGACTACACA GCAGGCAAGT CAAGCGATTC GTGACGGTAT AAAAAGTGGC AATGACGTTA TTGAATTTCC CAAAAAACTG ACGTTACCAT TAAAAGTATT AGGGACATTA CCTGATATAG TTTGGCAACA GGTCAGTACA AAAATCAATA AAAAATAG
|
Protein sequence | MTDTAKKQHI VITGATSGIG YQLAKDYLRE GQHVYAVGRD EEALSELKSL GAETVDLDLM DRDKVIAAFD KINEIDLAIC GAGMCEYLDM PNFDSTAFMK VLSVNMGTLS HAIEAVLPKL IASKGRLVGI GSASAYVPFA RAEAYGSSKA AIHYLMKTLQ ISLAPQGVAV SLVVPGFVET PMTKQNDFPM PFLQTTQQAS QAIRDGIKSG NDVIEFPKKL TLPLKVLGTL PDIVWQQVST KINKK
|
| |