| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0725 |
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| Symbol | dapD |
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| ID | 4034127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | - |
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| Start bp | 853575 |
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| End bp | 854396 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637973189 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_579992 |
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| Protein GI | 93005555 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.643959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTAC AACAAACCAT CGAACAAGCT TTTGAGAACC GCAACGAGTA TAGCCCAGCA
ACCATGCCAC AAGATGTCCG TGATGCCATC AATCAAGTAC TTGAGCAGCT AGATAACGGC
ACTTTGCGCG TTGCAGAAAA AAAGGATGGC GAATGGGTCG TCAATCAGTG GGCAAAAAAA
GCTGTCTTGC TATCGTTCCG CTTAAATGAC AACTACGTTC AAGCAGCGGG CGAGCATGTC
CAGTTTTATG ACAAGGTACC AACCAAATTT GCAAATTGGA CAGAAGCGCA GTTTAAAGAA
GCTGGCGTGC GTGTTGTACC GCCAGCCGTT GCGCGTAAAG GCTCTTATAT CGCGCCAGGC
GCCGTATTGA TGCCATCGTA TGTTAATATC GGTGCTTATG TCGATCAAGG CGCTATGGTA
GATACCTGGG CGACCGTTGG TTCATGTGCT CAAATCGGTA AAAATGTCCA TCTATCAGGC
GGTGTCGGTA TCGGTGGTGT TCTAGAGCCA TTACAAGCCA ATCCGACTAT CATTGAAGAC
AACTGCTTTA TCGGTGCGCG CTCTGAAATC GTTGAAGGCG TTATCGTAGA AGAAGGCGCA
GTGATCTCTA TGGGCGTCTA TATCGGTCAA TCTACTCGTA TTTATGATCG CGAAACTGGC
GAGATTCATC GTGGTCGCGT ACCAGCAGGC TCAGTTGTTG TGCCAGGTAG CTTGCCTTCT
GAAGATGGTA CGCATAGTTT GTATGCAGCT ATCATCGTGA AAAAAGTCGA TGCGCAAACC
CGTGCTAAAA CATCCGTAAA TGAGTTATTA CGTTTAGCTT AA
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| Protein sequence | MSLQQTIEQA FENRNEYSPA TMPQDVRDAI NQVLEQLDNG TLRVAEKKDG EWVVNQWAKK
AVLLSFRLND NYVQAAGEHV QFYDKVPTKF ANWTEAQFKE AGVRVVPPAV ARKGSYIAPG
AVLMPSYVNI GAYVDQGAMV DTWATVGSCA QIGKNVHLSG GVGIGGVLEP LQANPTIIED
NCFIGARSEI VEGVIVEEGA VISMGVYIGQ STRIYDRETG EIHRGRVPAG SVVVPGSLPS
EDGTHSLYAA IIVKKVDAQT RAKTSVNELL RLA
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