| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0490 |
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| Symbol | rpsC |
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| ID | 4035833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 596253 |
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| End bp | 596981 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637972945 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_579757 |
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| Protein GI | 93005320 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000127993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0282319 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGACAAA AAGTACATCC AATCGGAATT CGTCTTGGTG TTGTAAAAAA GCATAACGCA
AACTGGTATG CTAGCCCTAA ACAATACTCA GAATACCTAA TTAACGACAT TCAGGTTCGT
GAATATCTGC GCAAGAAACT TGATAGTGCT ATGATTAGCA AGATCATGAT TGAGCGTCCT
ACTGGTGCTG CTAAGATTAC CATCGCCACT GCGCGTCCTG GTATTGTTAT CGGTAAGAAA
GGCGAAGATA TTGAAAGACT TCAAAAAGAA TTGACCAAAA TTATGGGCGT ACCTGCTCAG
GTCAACATTG AAGAAATCAC CTCGCCTGAT CTTGATGCTC ATTTAGTAGC GGAAGGCATC
GCAAGTCAGC TTGAGCGTCG TGTGATGTTC CGCCGTGCTA TGAAGCGTGC GGTACAGAAC
AGCATGCGTT CTGGTGCTAA AGGTATTAAA GTTGAGCTGT CTGGCCGTCT TGGCGGTGCT
GAGATTGCTC GTACTGAATG GTACCGTGAA GGTCGTGTGC CACTGCATAC ACTACGCGCT
GATATCGACT ATTCGTCAGT ACGTGCGGAA ACCACTTACG GCACCATCGG TGTAAAAGTT
TGGATCTTCC GTGGCGAAAT CCTTGACGGT ATGAACAGTG TATACAATCC CGTTAAAGAA
GAGCAGACTC GTGCGCCAAA ACGCCGTGGT CGTGGAAACG GAAACCGTCG AAACACAGAC
AGAGGTTAA
|
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| Protein sequence | MGQKVHPIGI RLGVVKKHNA NWYASPKQYS EYLINDIQVR EYLRKKLDSA MISKIMIERP
TGAAKITIAT ARPGIVIGKK GEDIERLQKE LTKIMGVPAQ VNIEEITSPD LDAHLVAEGI
ASQLERRVMF RRAMKRAVQN SMRSGAKGIK VELSGRLGGA EIARTEWYRE GRVPLHTLRA
DIDYSSVRAE TTYGTIGVKV WIFRGEILDG MNSVYNPVKE EQTRAPKRRG RGNGNRRNTD
RG
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