| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0468 |
|---|
| Symbol | trpA |
|---|
| ID | 4034825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 574322 |
|---|
| End bp | 575140 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637972922 |
|---|
| Product | tryptophan synthase subunit alpha |
|---|
| Protein accession | YP_579735 |
|---|
| Protein GI | 93005298 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0159] Tryptophan synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.270777 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.54371 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGAA TTGAAAGCAC CTTTGAAACC CTAAAAGCAC AAAATAAAAA AGCACTCATC
CCTTATGTGA TGGCAGGCGA TCCCAATCCA AGCAACTTTG TTGGCTTGCT GCATGATTTA
GTCAAGCATG GCGCAGATAT GATTGAAGTG GGCTTACCAT TTTCTGACCC AATGGCAGAT
GGTCCTACAG TAGCATTGGC AGGCGAGCGT GCATTAGCAG CGGGTACGAG CACTCGTGAT
GCACTAAAGA TGGTCAAAGA GTTCCGTCAG CAAGATACGC AGACGCCAAT TATCCTGATG
GGTTACCTTA ATCCAGTAGA GATTATCGGT TATGATAACT TTGTCTCTTT ATGTGAGCAG
TCAGGCGTCG ATGGTATTTT GATGGTTGAT TTGCCGCCAG CAGAAGCGGG TAGCTTTACC
CAGCATTTGA CTGAGCACGC GATGAATGAG ATTTTCTTAT TATCACCAAC TACGCTGGCT
GAACGTCGTC AGCAAGTATT GACCCATTGC GGTGGTTATA TCTACTACGT GTCTTTAAAA
GGCGTGACGG GTTCAGCAAC GCTAGATACT GACGATGTTG CAAAGCAAGT ACAGGCCATT
AAAGCAGAGA CAGATTTGCC AGTATGTGTG GGCTTTGGTA TTCGTGATGC AACTTCTGCC
AAAGCAATTG GTGCTCATGC GGATGGTATT ATCGTCGGTA GTGCATTGGT ACAGAACTTT
GCTGATATCG ATGCCAATGA TATCACTGCA GTCGCTAATG CTCAGCAAAA AATTATGGCA
AAAATGGATG AGTTACGCGG CGCACTCGAT AGTTTATAA
|
|---|
| Protein sequence | MTRIESTFET LKAQNKKALI PYVMAGDPNP SNFVGLLHDL VKHGADMIEV GLPFSDPMAD
GPTVALAGER ALAAGTSTRD ALKMVKEFRQ QDTQTPIILM GYLNPVEIIG YDNFVSLCEQ
SGVDGILMVD LPPAEAGSFT QHLTEHAMNE IFLLSPTTLA ERRQQVLTHC GGYIYYVSLK
GVTGSATLDT DDVAKQVQAI KAETDLPVCV GFGIRDATSA KAIGAHADGI IVGSALVQNF
ADIDANDITA VANAQQKIMA KMDELRGALD SL
|
|---|
| |