Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0325 |
Symbol | |
ID | 4034088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 393305 |
End bp | 394105 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637972774 |
Product | extracellular solute-binding protein |
Protein accession | YP_579593 |
Protein GI | 93005156 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTCGA ATTCTCGCCT ATTATGGTCA TCGATTACCG TTACTGCCGC GCTCATGTTA GGTGCGTGTA GCCAACCTGC CAATGACGCT GCTGATACCA ATGCAGATGC ACCGGCAGCA GGAACCACTG GCAAGACCAT TCGTATTGCG ACTGAAGGCG CATACCCTCC TTTTAACTAT ACCAATGCCG ATGGCAGTTT GGCGGGTTTC GATATCGACG TTGCCAATGC TCTATGTGAG CAGATGCAAG CCAAATGTGA AATTGTCGCT CAAGATTGGG ACGGTATTAT TCCGGGTTTA TTGGCGCAAA AATACGATGC GGTTATCGCT GGTATGTCTA TTACCGCTGA ACGTCAAGAA AAAGTCGATT TTAGTGAGCC TTACTTTGCC AATACGATGG TTTGGCTGAC CGATACCAAA GGCAGCTTTG ATCCTAAAGT CATCAAAAAT CTGACGCTTG GTGGTCAACG TTCAACGACA CCAGGTGCTT ATTTACAAGA CAATTATGAA GGCAAAGATG GCAATACCGT TAAGCTTTAT GACAATTATG ACAATGCTTA TTTGGACCTG AAGTCTGGTC GTAGTGATGT TGTATTGGCT GAAAAAGTAT CAGCAAAATC ATGGTTAGCA GACAACCCTG AAGGCTTCGG TATCGTGGGT GATGAGATTG ACAATGATGA CAATATTGCG ATTGCTGTCC GTAAAGGCGA TGCCATTAAA GAAGACTTTA ATAAAGCGCT GAATGAAATT CGCAGTAACG GTGAGCTTGC CCGTCTTGAG CAGCAAAACT TTGGTCAATA A
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Protein sequence | MMSNSRLLWS SITVTAALML GACSQPANDA ADTNADAPAA GTTGKTIRIA TEGAYPPFNY TNADGSLAGF DIDVANALCE QMQAKCEIVA QDWDGIIPGL LAQKYDAVIA GMSITAERQE KVDFSEPYFA NTMVWLTDTK GSFDPKVIKN LTLGGQRSTT PGAYLQDNYE GKDGNTVKLY DNYDNAYLDL KSGRSDVVLA EKVSAKSWLA DNPEGFGIVG DEIDNDDNIA IAVRKGDAIK EDFNKALNEI RSNGELARLE QQNFGQ
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