Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0283 |
Symbol | |
ID | 4035615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 342361 |
End bp | 343392 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637972732 |
Product | pseudouridine synthase, RluD |
Protein accession | YP_579551 |
Protein GI | 93005114 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.131037 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAACT CAAAAATGAC AAACGACGAA CCTATCCACG AAGCGCCAGC TATCTTTAAT AGCAAAACGC GCCCACAAAG TGCTGACGAT GAGATTAGCA ACTTCGGCAA GGTCAATTAC CTTGAAGTCA CGCGTCATCA GCACGACCAG CGCTTGGATA ACTTTTTGCT TAATCGCTTA AAAGGTTTGC CAAAACCGCA TATCTATAAA ATGATTCGCT CAGATGAGAT TCGCGTCAAT AACAAGCGCT GCAAGGCTCA TGACAGAGTG CAGCGTGAAG ACGTGGTACG TATTGCGCCA GTGGTACTTG CCACTCGTGA AAAACCTATC ATCAGTACCG AATTTGCCAA AAGCTTATTG GCGCGTGTGG TCTATGAGGA TGAAGGTTTG ATCGTGCTTA ATAAACCATC CGGTATTGCG GTTCATGGCG GTAGTGGTCT TGCATTTGGT GTCATTGAAG CCATGCGTGA AGTCACAGGC AAGAAGTATT TAGAGCTGGT GCATCGTATC GATAAAGATA CTTCAGGTTT ATTAATGATC TCTAAAAAAC GCTCTGCACT TAAAGTATTG CAGCAACATC TGGTCGACAA AACCATTCAA AAGCATTATT TATGTATTGC AAAAGGTCAG CCTGCACTTA ACGAACAACG TATCGATGCG TCATTGTTGC GTTATACACT GGCAAGCGGT GAGCGCCGCG TTAAGGTAGA TACACAAGAC CCGCAAACCA AAGAGAGTCA GACTGATATC GTCGTTCATG GTCGTTTTAT GATTGCTGAG CAGCCCGTTA GCTTGATTGA AGCCAAGCCG CTCACCGGAC GTACCCATCA AATTCGTGTA CATTTGGCGC ACATTGGTCA TGCTATCTTG GGCGATGATA AGTACCATGT ACATGATAAA TCTGGTGTGC ATCGTCTATG CTTACATGCG TGGCGTCTAG ATATACCTGG TTATGAGACT ATCACTGCGC CTTTACCAGA AGAGATGCTC GACTGGATGC CAGAAGAGAT TAAAGCCAAT TTGCCTAAAT AA
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Protein sequence | MTNSKMTNDE PIHEAPAIFN SKTRPQSADD EISNFGKVNY LEVTRHQHDQ RLDNFLLNRL KGLPKPHIYK MIRSDEIRVN NKRCKAHDRV QREDVVRIAP VVLATREKPI ISTEFAKSLL ARVVYEDEGL IVLNKPSGIA VHGGSGLAFG VIEAMREVTG KKYLELVHRI DKDTSGLLMI SKKRSALKVL QQHLVDKTIQ KHYLCIAKGQ PALNEQRIDA SLLRYTLASG ERRVKVDTQD PQTKESQTDI VVHGRFMIAE QPVSLIEAKP LTGRTHQIRV HLAHIGHAIL GDDKYHVHDK SGVHRLCLHA WRLDIPGYET ITAPLPEEML DWMPEEIKAN LPK
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