Gene Pcryo_0278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0278 
Symbol 
ID4035610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp331717 
End bp332898 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content48% 
IMG OID637972727 
ProductAcetyl-CoA C-acetyltransferase 
Protein accessionYP_579546 
Protein GI93005109 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000883017 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.145128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACATG ATGCAATTGT AATCTTAAAC GGCGCTCGCA CCCCGATGGG CGGCTTCCAA 
GGCGCATTGA CAGACATAAG CGCCACAGAT TTGGGCGCAG CGGCTATCAA AGCAGCTGTT
GCGCGTTCAG GCGTTAATGT TGATAATATT GATGAAGTTA TTATGGGCTG TATCTTAACC
GCAGGTTTGG GTCAAGGTCC TGCGCGTCAA GCGATGCGCA AAGCTGGCTT GTCTGATGCA
ACGGGTGCGG TTACCATCAA TAAGCTGTGC GGCTCAGGTC TAAAAGCAGT TATGCAAGCT
CATGACGGTA TCAAAGCCGG AAGCTTTAAG GTTGCTGTTG CTGGCGGTAT GGAGTCGATG
ACCAATGCGC CTTATATCAT GCCAGGGTCG CGTGGTGGCT ATCGCATGGG ACATAAAGAA
GTCAAAGATC ATATGTTCTT AGACGGTCTA GAAGATGCCG ATACTGGCAA GCTAATGGGT
CAATTTGCAC AAGAAATGGC GGATGAAAAA GGCTATACGC GCGAACAAAT GGATGATTTT
GCTATTGAGT CGCTAAATCG TGCACTAACA GCGATCAAAG ACAATCATTT CAAAGATGAA
ATTGAACCAG TTACGTTCAA AACTCGTAAA GGCGAGCAAA CGGTTGATAC CGATGAGCAG
CCTGCCCTTG CTAATGCTGA GCGCATCCCT ACTTTGCGTC CTGCCTTTGC AAAAGACGGT
ACCATCACCG CAGCAAACGC TAGCTCTATC TCAGACGGTG CTGCAGCTGT TGTATTGATG
AAAGAGTCAC AAGCCAAAGA AGAAGGTCTA GAGTATCAAG CGCGTATCAT CGCGACTGCC
TCTAATTCTC GTCATCCAAG CGAGTTCACT ATTGCCCCTG TTGGCGCAAT TGAAAAAGTA
TTGGCAAGTG CTAGCTGGTC AGTCGCTGAT GTCGATTTAT GGGAAATCAA TGAAGCATTT
GCCATGGTTA CGATGGCAGC AATGGATGAG CTAAACATCG AACATGCTAA AGTAAACATA
GAAGGCGGTG CTTGTGCCCT TGGTCATCCA GTGGGCTGTT CAGGCGCTCG TATCCTAGTG
ACGCTTATTA ACTCTCTAAA GCGTACTGGT GGCAAAAAAG GCGTTGCTAC ACTATGTATC
GGTGGCGGCG AAGCAGTAGC AGTAGCAATC GAATTGGCTT AA
 
Protein sequence
MSHDAIVILN GARTPMGGFQ GALTDISATD LGAAAIKAAV ARSGVNVDNI DEVIMGCILT 
AGLGQGPARQ AMRKAGLSDA TGAVTINKLC GSGLKAVMQA HDGIKAGSFK VAVAGGMESM
TNAPYIMPGS RGGYRMGHKE VKDHMFLDGL EDADTGKLMG QFAQEMADEK GYTREQMDDF
AIESLNRALT AIKDNHFKDE IEPVTFKTRK GEQTVDTDEQ PALANAERIP TLRPAFAKDG
TITAANASSI SDGAAAVVLM KESQAKEEGL EYQARIIATA SNSRHPSEFT IAPVGAIEKV
LASASWSVAD VDLWEINEAF AMVTMAAMDE LNIEHAKVNI EGGACALGHP VGCSGARILV
TLINSLKRTG GKKGVATLCI GGGEAVAVAI ELA