| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0220 |
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| Symbol | dapF |
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| ID | 4035700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 263966 |
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| End bp | 264853 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637972666 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_579488 |
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| Protein GI | 93005051 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0184363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAATAG AATTTACTAA GATGCATGGG TTGGGCAATG ACTTTATGGT CATCGATTTG
GTGACTCAGC GTTTGGACTT GACCAAGGAT TTGGTGCAGT TACTGGGTGA TCGTCATTTA
GGTATTGGTT TTGATCAATT GCTCGTCGTT GAGCCGCCGA TGCGCCCCGA CGTTGATTTT
AGTTATCGTA TTTTTAATAC GGATGGCACA GAAGTTGAGC AATGCGGTAA TGGCGCCCGC
TGTTTTGCCC GTTTTGTGCA AGCGCGCAAG TTATCCTTTA AACAACGTCT CCGTGTTGAG
ACGGCAAGCG GCATTATTTC GCTCACGACC GATCGTTATG GCTGGGTAGA GGTTGATATG
GGCAAGCCCA AGTTTGAGCC AAGTGAGATT CCATTTACCC CAAGAGCCAT CACCAAAATC
CAAAATGCTT ATCATCTGGA CGTGAATGGT ACGCCGGTGC AGCTTTATGT TGCCAATATG
GGCAATCCGC ATGCGGTGAT AAAAGTTGAC GATGTGCTTG ATGCTGACGT TGAAACCTTG
GGTAAAGCCA TCGAATCGCA TCCAGCGTTT CCAGAACGTG TCAATGTCGG TTTTATGCAA
ATAATGAATC AACGTCATAT TCGTCTAAGA GTATTCGAAC GTGGTGTCGG TGAGACGCAA
GCCTGTGGTA CGGGCGCTTG TGCAGCCGTT GCCATCGGTA TACGCGAAGG TTGGCTTGAC
GAAGGTGAAG ATGTGCGTGC TCAGCTCTAT GGCGGCAGCA TGGTAATTAA ATGGCAGCCG
GGCTATTCGG TCATGATGAC CGGACCAACC GCATTTGTGT ATGAAGGTGT CTTTAGTCCA
GATGGCTTGA TGGCACAAGC CGGTATCAAG CCCAATCCAG AAAGTTAA
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| Protein sequence | MLIEFTKMHG LGNDFMVIDL VTQRLDLTKD LVQLLGDRHL GIGFDQLLVV EPPMRPDVDF
SYRIFNTDGT EVEQCGNGAR CFARFVQARK LSFKQRLRVE TASGIISLTT DRYGWVEVDM
GKPKFEPSEI PFTPRAITKI QNAYHLDVNG TPVQLYVANM GNPHAVIKVD DVLDADVETL
GKAIESHPAF PERVNVGFMQ IMNQRHIRLR VFERGVGETQ ACGTGACAAV AIGIREGWLD
EGEDVRAQLY GGSMVIKWQP GYSVMMTGPT AFVYEGVFSP DGLMAQAGIK PNPES
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