Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0136 |
Symbol | |
ID | 4035495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 158738 |
End bp | 161260 |
Gene Length | 2523 bp |
Protein Length | 840 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637972578 |
Product | RNA binding S1 |
Protein accession | YP_579404 |
Protein GI | 93004967 |
COG category | [K] Transcription |
COG ID | [COG2183] Transcriptional accessory protein |
TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.43679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGCA CTGATACCTT AACGCCATCT CAAACCTCGA CAAATGCACA GGTTTTGGAT GCAACCACAC ACGCGAATAT TCACGACAAG CTTGCTCGCG CGCTTGGCAT TAAGACTGCT CAAGTCAATG CGTTTGTCAA ACTGTACGAT GAAGGCGCGA CCGTTCCGTT TATTGCCCGT TACCGCAAAG AAAAGACGCA GAATCTCGAC GATGCGCAAT TGCGCGCACT AGAGAAGTCT CTCAATTATG AACGTGATAT GGCAACCCGT CGCCTTAAAA TTATTGAATT ACTGAGCACA CAAGGCAATT TGACTGACGA GCTGCAGACA CGTATTGATA ATGCAACCTC AAAACTTGAG CTTGAAGACA TCTACTTGCC ATATCGTCCG CGCCGCCGTT CACCAGCTGC CAAAGCACGT GCTGCTGGTC TTGATATTGC TGCACAAGCA GTGTTGACGC AAAACGTGAC GCCAACCGAT GCATTAGCAG ACTATCAAGT ACAATCAAGC ATTACTGATG AAAGCGGTAA TGAGATTGAA GTTGATTTTA GTGATATCGA GAAGCAACTT GCTGGTGTAC AAGCCATTAT CGTAGATGAA TGGACGCAAG CATTAGACTT GTTAGATCAT TTACGTAGCA GTTTTGCCAA AACAGCCAGT ATCGTATCGA GCGTTGCCAG TGAAGAAAAA CGTGAAGTCG GTGAAAAATT CAAAGATTAC TTTGAGCATA GCGAAAGCCT TGCACGTTTG CCAAATCATC GCTTATTAGC GATGCTACGT GGTCGTCAAG AAAACGTCTT GGGTCTAAAA ATTGAAGGCG AAAATGCGCC TTTTATTGAA AAAATTATTA AGCATTTTGA GATTGATGCT AAAGCGCCAA CTGAGCGTCA AGAATTTTTG ACAGAAGCGG CGAGCAGCTT ATGGAAAGAC AAATGGCGTC CGCATATCGA GCATCGTTTA TTGACTGAAA AGCGTCTGAC TGCAGAAGCG GCTGCGATTG ATGTTTTTGC CAATAATTTA CAGCATTTAC TGATGTCAGC ACCTGCTGGT CGCAAAGTTA TTTTGGGTGT TGATCCCGGT ATCCGTCATG GCGTTAAGAT GGCGATTGTT GATGCTCAAG GTCATGTGAT GTTAGATGGC GAAGACAAGC CTGTTATCGC AACGGTTTAT CCATTTGCGC CTGATAATAA AATGACTGAA GCCAAAGTGG TTATCGATGA GTTATTAAGT ACTTATAATG TGGATCTAGT GGCTATCGGT AATGGTACGG CAAGCCGCGA AACAGACGCA ATGATTAAAG AGATTTTGGC GGCGAACGAG TCATTAAAAG CTAAAGCAGT CATCGTGAAT GAATCTGGCG CGTCAGTCTA TTCTGCCAGT GAGCTTGCTA CTGATGAGCT TGGTAATTTA GATGTCTCTG TACGTGGGGC AGTATCTATT GCTCGTCGTC TACAAGACCC ATTGTCAGAG CTGGTCAAGG TAGATCCAAA AGCCATTGGT GTTGGTCAAT ATCAACATGA TGTCAATCAA GCTCAGTTGG CAGATAGTCT TGATAAAGTC ACACAAGACA GCGTTAACGC CGTTGGTGTT GATGTGAATA CGGCAAGCCC CGCTATCTTG GCACACATTG CTGGCTTAAA TAAGAATGTT GCGCAGCAAA TCGTTACCTA TCGCAAAGAG CATGGCGCTT TTGATAGCCG CGAGTCATTG AAAAATGTGC CGCGCTTAGG TGCTAAGACC TTTGAGCAAG CCGCAGGCTT CTTACGCATA CATGATGGTA GCAATCCACT TGATGCAACT GGTGTACATC CAGAAAGCTA TGCGCTGGTC GACAGCTTAC TTGCCCAAAC AGGTAAAGCC TTGCCAGAAG TTATCGGTAA CGACGGTGTG TTAAACAGTA TCGATACCAC AGCGCTAGCT GCTAATGATG AAAATGTTAG CGTAAAAGCG ATTTTAGATG AGCTTGCTAA GCCCGCTCGT GACCCACGTC CTGAGTTTAA GACGGCTAAC TTCCGTGAAG ATGTGAACAG CATTAAAGAT TTGAGCGAAG GCATGACACT AGAAGGGGTT GTTACCAACG TGACTGCCTT TGGTTGCTTC ATCGATGTTG GCGTGCATCA AGATGGTCTG GTTCATATCT CGCAAATGGC CAATGACTTT GTCGCAGACC CGATGAACCG CGTCAAGCCC GGTGATATCG TCTCGGTCCG TGTCATCTCT ATTGACGAAA AACGCGGTCG TATTGGTTTT AGTATGAAAC CTGAAGCTGA AAAACCTGCA CGTCCAGCAG CGAAACCTGC AACGACAAAT GTTACTAATA ATGATGAGAA TACCAGTCGT CCGCGCAGCA ATCGTCCAGC TGGCGATAAG CGTCCGTCTA AGCCTAAGCG TCAACCTAGT AGCAGCAATA ATAGCGACAG TCGCAGTAAG GCGCCTCGTG CAGAAAAAGC AGAATCGCCT AGCAAAATGG GTACTTTCGG CGCGCTATTG CAAGAAGCAG GTGTGACTAA AGTTAAGAAA TAA
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Protein sequence | MSSTDTLTPS QTSTNAQVLD ATTHANIHDK LARALGIKTA QVNAFVKLYD EGATVPFIAR YRKEKTQNLD DAQLRALEKS LNYERDMATR RLKIIELLST QGNLTDELQT RIDNATSKLE LEDIYLPYRP RRRSPAAKAR AAGLDIAAQA VLTQNVTPTD ALADYQVQSS ITDESGNEIE VDFSDIEKQL AGVQAIIVDE WTQALDLLDH LRSSFAKTAS IVSSVASEEK REVGEKFKDY FEHSESLARL PNHRLLAMLR GRQENVLGLK IEGENAPFIE KIIKHFEIDA KAPTERQEFL TEAASSLWKD KWRPHIEHRL LTEKRLTAEA AAIDVFANNL QHLLMSAPAG RKVILGVDPG IRHGVKMAIV DAQGHVMLDG EDKPVIATVY PFAPDNKMTE AKVVIDELLS TYNVDLVAIG NGTASRETDA MIKEILAANE SLKAKAVIVN ESGASVYSAS ELATDELGNL DVSVRGAVSI ARRLQDPLSE LVKVDPKAIG VGQYQHDVNQ AQLADSLDKV TQDSVNAVGV DVNTASPAIL AHIAGLNKNV AQQIVTYRKE HGAFDSRESL KNVPRLGAKT FEQAAGFLRI HDGSNPLDAT GVHPESYALV DSLLAQTGKA LPEVIGNDGV LNSIDTTALA ANDENVSVKA ILDELAKPAR DPRPEFKTAN FREDVNSIKD LSEGMTLEGV VTNVTAFGCF IDVGVHQDGL VHISQMANDF VADPMNRVKP GDIVSVRVIS IDEKRGRIGF SMKPEAEKPA RPAAKPATTN VTNNDENTSR PRSNRPAGDK RPSKPKRQPS SSNNSDSRSK APRAEKAESP SKMGTFGALL QEAGVTKVKK
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