Gene Pcryo_0136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0136 
Symbol 
ID4035495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp158738 
End bp161260 
Gene Length2523 bp 
Protein Length840 aa 
Translation table11 
GC content46% 
IMG OID637972578 
ProductRNA binding S1 
Protein accessionYP_579404 
Protein GI93004967 
COG category[K] Transcription 
COG ID[COG2183] Transcriptional accessory protein 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.43679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCA CTGATACCTT AACGCCATCT CAAACCTCGA CAAATGCACA GGTTTTGGAT 
GCAACCACAC ACGCGAATAT TCACGACAAG CTTGCTCGCG CGCTTGGCAT TAAGACTGCT
CAAGTCAATG CGTTTGTCAA ACTGTACGAT GAAGGCGCGA CCGTTCCGTT TATTGCCCGT
TACCGCAAAG AAAAGACGCA GAATCTCGAC GATGCGCAAT TGCGCGCACT AGAGAAGTCT
CTCAATTATG AACGTGATAT GGCAACCCGT CGCCTTAAAA TTATTGAATT ACTGAGCACA
CAAGGCAATT TGACTGACGA GCTGCAGACA CGTATTGATA ATGCAACCTC AAAACTTGAG
CTTGAAGACA TCTACTTGCC ATATCGTCCG CGCCGCCGTT CACCAGCTGC CAAAGCACGT
GCTGCTGGTC TTGATATTGC TGCACAAGCA GTGTTGACGC AAAACGTGAC GCCAACCGAT
GCATTAGCAG ACTATCAAGT ACAATCAAGC ATTACTGATG AAAGCGGTAA TGAGATTGAA
GTTGATTTTA GTGATATCGA GAAGCAACTT GCTGGTGTAC AAGCCATTAT CGTAGATGAA
TGGACGCAAG CATTAGACTT GTTAGATCAT TTACGTAGCA GTTTTGCCAA AACAGCCAGT
ATCGTATCGA GCGTTGCCAG TGAAGAAAAA CGTGAAGTCG GTGAAAAATT CAAAGATTAC
TTTGAGCATA GCGAAAGCCT TGCACGTTTG CCAAATCATC GCTTATTAGC GATGCTACGT
GGTCGTCAAG AAAACGTCTT GGGTCTAAAA ATTGAAGGCG AAAATGCGCC TTTTATTGAA
AAAATTATTA AGCATTTTGA GATTGATGCT AAAGCGCCAA CTGAGCGTCA AGAATTTTTG
ACAGAAGCGG CGAGCAGCTT ATGGAAAGAC AAATGGCGTC CGCATATCGA GCATCGTTTA
TTGACTGAAA AGCGTCTGAC TGCAGAAGCG GCTGCGATTG ATGTTTTTGC CAATAATTTA
CAGCATTTAC TGATGTCAGC ACCTGCTGGT CGCAAAGTTA TTTTGGGTGT TGATCCCGGT
ATCCGTCATG GCGTTAAGAT GGCGATTGTT GATGCTCAAG GTCATGTGAT GTTAGATGGC
GAAGACAAGC CTGTTATCGC AACGGTTTAT CCATTTGCGC CTGATAATAA AATGACTGAA
GCCAAAGTGG TTATCGATGA GTTATTAAGT ACTTATAATG TGGATCTAGT GGCTATCGGT
AATGGTACGG CAAGCCGCGA AACAGACGCA ATGATTAAAG AGATTTTGGC GGCGAACGAG
TCATTAAAAG CTAAAGCAGT CATCGTGAAT GAATCTGGCG CGTCAGTCTA TTCTGCCAGT
GAGCTTGCTA CTGATGAGCT TGGTAATTTA GATGTCTCTG TACGTGGGGC AGTATCTATT
GCTCGTCGTC TACAAGACCC ATTGTCAGAG CTGGTCAAGG TAGATCCAAA AGCCATTGGT
GTTGGTCAAT ATCAACATGA TGTCAATCAA GCTCAGTTGG CAGATAGTCT TGATAAAGTC
ACACAAGACA GCGTTAACGC CGTTGGTGTT GATGTGAATA CGGCAAGCCC CGCTATCTTG
GCACACATTG CTGGCTTAAA TAAGAATGTT GCGCAGCAAA TCGTTACCTA TCGCAAAGAG
CATGGCGCTT TTGATAGCCG CGAGTCATTG AAAAATGTGC CGCGCTTAGG TGCTAAGACC
TTTGAGCAAG CCGCAGGCTT CTTACGCATA CATGATGGTA GCAATCCACT TGATGCAACT
GGTGTACATC CAGAAAGCTA TGCGCTGGTC GACAGCTTAC TTGCCCAAAC AGGTAAAGCC
TTGCCAGAAG TTATCGGTAA CGACGGTGTG TTAAACAGTA TCGATACCAC AGCGCTAGCT
GCTAATGATG AAAATGTTAG CGTAAAAGCG ATTTTAGATG AGCTTGCTAA GCCCGCTCGT
GACCCACGTC CTGAGTTTAA GACGGCTAAC TTCCGTGAAG ATGTGAACAG CATTAAAGAT
TTGAGCGAAG GCATGACACT AGAAGGGGTT GTTACCAACG TGACTGCCTT TGGTTGCTTC
ATCGATGTTG GCGTGCATCA AGATGGTCTG GTTCATATCT CGCAAATGGC CAATGACTTT
GTCGCAGACC CGATGAACCG CGTCAAGCCC GGTGATATCG TCTCGGTCCG TGTCATCTCT
ATTGACGAAA AACGCGGTCG TATTGGTTTT AGTATGAAAC CTGAAGCTGA AAAACCTGCA
CGTCCAGCAG CGAAACCTGC AACGACAAAT GTTACTAATA ATGATGAGAA TACCAGTCGT
CCGCGCAGCA ATCGTCCAGC TGGCGATAAG CGTCCGTCTA AGCCTAAGCG TCAACCTAGT
AGCAGCAATA ATAGCGACAG TCGCAGTAAG GCGCCTCGTG CAGAAAAAGC AGAATCGCCT
AGCAAAATGG GTACTTTCGG CGCGCTATTG CAAGAAGCAG GTGTGACTAA AGTTAAGAAA
TAA
 
Protein sequence
MSSTDTLTPS QTSTNAQVLD ATTHANIHDK LARALGIKTA QVNAFVKLYD EGATVPFIAR 
YRKEKTQNLD DAQLRALEKS LNYERDMATR RLKIIELLST QGNLTDELQT RIDNATSKLE
LEDIYLPYRP RRRSPAAKAR AAGLDIAAQA VLTQNVTPTD ALADYQVQSS ITDESGNEIE
VDFSDIEKQL AGVQAIIVDE WTQALDLLDH LRSSFAKTAS IVSSVASEEK REVGEKFKDY
FEHSESLARL PNHRLLAMLR GRQENVLGLK IEGENAPFIE KIIKHFEIDA KAPTERQEFL
TEAASSLWKD KWRPHIEHRL LTEKRLTAEA AAIDVFANNL QHLLMSAPAG RKVILGVDPG
IRHGVKMAIV DAQGHVMLDG EDKPVIATVY PFAPDNKMTE AKVVIDELLS TYNVDLVAIG
NGTASRETDA MIKEILAANE SLKAKAVIVN ESGASVYSAS ELATDELGNL DVSVRGAVSI
ARRLQDPLSE LVKVDPKAIG VGQYQHDVNQ AQLADSLDKV TQDSVNAVGV DVNTASPAIL
AHIAGLNKNV AQQIVTYRKE HGAFDSRESL KNVPRLGAKT FEQAAGFLRI HDGSNPLDAT
GVHPESYALV DSLLAQTGKA LPEVIGNDGV LNSIDTTALA ANDENVSVKA ILDELAKPAR
DPRPEFKTAN FREDVNSIKD LSEGMTLEGV VTNVTAFGCF IDVGVHQDGL VHISQMANDF
VADPMNRVKP GDIVSVRVIS IDEKRGRIGF SMKPEAEKPA RPAAKPATTN VTNNDENTSR
PRSNRPAGDK RPSKPKRQPS SSNNSDSRSK APRAEKAESP SKMGTFGALL QEAGVTKVKK