| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0109 |
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| Symbol | sdhA |
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| ID | 4034441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 125480 |
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| End bp | 127330 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637972551 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_579377 |
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| Protein GI | 93004940 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.461726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACTA GACAAGACAA TACCATTAGC AATATCAAAA CCCTAAACTA TGACGCGGTC
ATCGTTGGTG GTGGTGGTTC AGGTATGCGT GCATCATTGC ACTTAGCTGA AGCCGGCATG
AAGGTTGCAG TCTTAACCAA AGTATTCCCA ACCCGCTCGC ACACTGTTGC AGCTCAGGGC
GGTATCGGTG CAAGTCTCGG TAACATGAGC AACGATAACT GGCATTTCCA CTTTTATGAT
ACCGTTAAAG GGTCAGACTG GTTGGGTGAC CAAGACGCGA TTGAGTACAT GTGCCGTGAA
GCGCCAAAAG TAGTATATGA GCTTGAGCAC ATGGGCATGC CGTTTGACCG TAATGAAGAT
GGCACAATTT ATCAGCGCCC ATTTGGTGGT CATACCTCAA ACTATGGCGA AAAAGCCGTA
CAACGTGCGT GTGCTGCTGC TGACCGTACC GGTCACGCGC TACTGCATAC TCTATATCAA
AAAAACCTGC AGCAAGGTAC TGAATTCTTT ATTGAGTGGA TTGCCCTTGA TTTGATCAAA
GATGAAGCCG GCAACATCAA TGGCGTCATC GCTATTGAGC AAGAAACTGG TACTGTTGCG
GTATTCCAGT CACCAATCAC TGTGTTAGCG ACAGGCGGCG CAGGTCGTAT CTTTGCTGCC
TCTACCAACG CTTATATTAA TACTGGTGAC GGTATTGGCA TGGCGGTTCG TGCTGGTATT
CCACTACAAG ACATGGAATT TTGGCAGTTC CACCCAACCG GCGTTCATGG TGCCGGCGTA
CTATTGACCG AAGGTTGCCG CGGTGAAGGC GCTATCTTAC GTAATAAAGA TGGCGAAGCC
TTTATGGAGC GTTATGCTCC AACCGTAAAA GACTTGGCAC CACGTGATTT AGTATCACGC
TCTATGGACC AAGAAATCAA AGAAGGCCGT GGTTGTGGTC CAAATGCTGA CCATATCGTG
ATGGATATGA CCCATTTAGG TGTTGAAACC ATCATGAAGC GTCTGCCATC AGTATTCGAG
ATTGGTAAGA ACTTTGCCAA CGTCGATATC ACGAAAGAGC CAATTCCTGT TATTCCAACC
ATTCATTATA TGATGGGCGG TATTCCAACC ACGATTCATG GTCAAGTGAT TGTACCGGAT
CTAGAAGCAG GTACGGATGA AGATGGTCTA TATGCAAAAG GCAACGTGGT TAAAGGTCTA
TATGCAATTG GCGAATGTGC GTGCGTCAGT GTTCACGGTG CCAACCGTTT AGGTACCAAC
TCATTGCTTG ATTTATTGGT ATTTGGTCGC GCTGCAGGTA AGCACATCGT CGATGAATTC
CATCATGCGG ATCATAACTA TAAGCCACTT GATCCTCGCG TCCTTGATTA CACAGTCGGT
CGTTTAGACA AGCTGCAACA GTCAACTTCA GGCTACAATG CGCAAGACGT TGCCGATGAG
ATTCGTGCAA CTATGCAAAC GCATGCCAGT GTATTCCGTA CACAAGCGAT GATGGATGAA
GGCGTTGCAA AAATCCTAGC GCTAGGCGAG AAGATTGATC AGATTCATTT GGCTGATAAA
TCACAAGTCT TTAACACTGC TCGTATTGAA GCCTTTGAAG TGGGCAATCT TTACGAAGTA
GCAAAAGCGA CGATGATATC AGCGGCCCAG CGTCATGAAA GCCGCGGCGC GCACAGTGTC
TCTGACTATG ATCGTCCTGA AGATGATGAA TACGCACCAA ACGGTCGTAA CGATAATGAT
TGGATGAAGC ATACCTTATG GTATTCTGAA GGCAATAAGA TTATCTATAA GCCGGTTCGT
AAAATTCCAT TAACGGTTGA TTATATCGAG CCAAAGGTTC GTGTCTACTA A
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| Protein sequence | MATRQDNTIS NIKTLNYDAV IVGGGGSGMR ASLHLAEAGM KVAVLTKVFP TRSHTVAAQG
GIGASLGNMS NDNWHFHFYD TVKGSDWLGD QDAIEYMCRE APKVVYELEH MGMPFDRNED
GTIYQRPFGG HTSNYGEKAV QRACAAADRT GHALLHTLYQ KNLQQGTEFF IEWIALDLIK
DEAGNINGVI AIEQETGTVA VFQSPITVLA TGGAGRIFAA STNAYINTGD GIGMAVRAGI
PLQDMEFWQF HPTGVHGAGV LLTEGCRGEG AILRNKDGEA FMERYAPTVK DLAPRDLVSR
SMDQEIKEGR GCGPNADHIV MDMTHLGVET IMKRLPSVFE IGKNFANVDI TKEPIPVIPT
IHYMMGGIPT TIHGQVIVPD LEAGTDEDGL YAKGNVVKGL YAIGECACVS VHGANRLGTN
SLLDLLVFGR AAGKHIVDEF HHADHNYKPL DPRVLDYTVG RLDKLQQSTS GYNAQDVADE
IRATMQTHAS VFRTQAMMDE GVAKILALGE KIDQIHLADK SQVFNTARIE AFEVGNLYEV
AKATMISAAQ RHESRGAHSV SDYDRPEDDE YAPNGRNDND WMKHTLWYSE GNKIIYKPVR
KIPLTVDYIE PKVRVY
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