Gene Pcryo_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0098 
Symbol 
ID4034430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp113639 
End bp114676 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content46% 
IMG OID637972540 
Productporphobilinogen deaminase 
Protein accessionYP_579366 
Protein GI93004929 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0181] Porphobilinogen deaminase 
TIGRFAM ID[TIGR00212] porphobilinogen deaminase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA TGCAGCAACC TGCTTTGACT ACCTTAAATA TCGCTACGCG CCAGAGCCCA 
CTAGCATTAT GGCAAGCTGA GCATATTCGT AATCGATTAC TAGCTTTGTA TCCTGAGATG
ACAATTAATC TGCTAAAAAT CGTGACTAAA GGTGACAAAA TTTTGGATAC GCCACTGGCT
AAAATTGGCG GCAAAGGTTT ATTTGTTAAA GAGCTTGAGC AAGCACTGTA TGACAAGCAA
GCAGATATCG CGGTGCACTC ACTCAAAGAC GTGCCCATGG ATTTACCAGA AGGGTTGACG
CTAGGCGTTT ATTGCAAACG TGCTTCACCA ACCGACGCTT TTGTATCGAA TACTTATCAT
AGTATCGCTG AGTTGCCACA AGGGGCGGTA GTCGGTACTG CAAGTTTGCG TCGTCAGTGT
CAAATCAAAG CTTATCGTCC CGATTTGCAA ATTAAAACCC TACGCGGCAA TGTCGGCACG
CGACTAAGCA AGTTAGATGC GGGCGAGTAT GATGCGATTA TTTTGGCGAC TAGTGGTCTA
AAGCGCATTG AGCTTGATGC ACGTATTCGT AGTGAGTTAG ATATCAATAT TTGCTTGCCA
GCGGTTGGGC AAGGCGCGTT AGCAATTGAA TGTCGTGAAG ATGATGCCGA CGTATTAAAA
TTATTGGCAC CACTTAATGA CGACAAAGCT CGTATCCGCT TAATCGCTGA GCGCGCATTA
AATCGTCATC TGCAGGGCGG TTGCCAAGTA CCTATCGCCG CTTATGCTGT ATTACAAAAG
GCAGATGCAT TGGCTGCTGA TAATGATAGC AATGATAATG ACAATGGTAA CAACGATGCT
GGCGATACCT TATGGCTGCG CGGTCGCGTT GGTCAAGAAG ATGGTAGCGA GCTGCTTAAG
GTGGACAAGC GCCAGACGTT AACAGGCAGT CAAGCTGAGC AAGAAGCCCA AGCAAACCAG
TTGGGTATCG AAGTTGCTGA GATGTTATTG CAAGCTGGTG CTGGTGAGAT TCTATCAGCG
ATCTATCATC CTGAATAA
 
Protein sequence
MSTMQQPALT TLNIATRQSP LALWQAEHIR NRLLALYPEM TINLLKIVTK GDKILDTPLA 
KIGGKGLFVK ELEQALYDKQ ADIAVHSLKD VPMDLPEGLT LGVYCKRASP TDAFVSNTYH
SIAELPQGAV VGTASLRRQC QIKAYRPDLQ IKTLRGNVGT RLSKLDAGEY DAIILATSGL
KRIELDARIR SELDINICLP AVGQGALAIE CREDDADVLK LLAPLNDDKA RIRLIAERAL
NRHLQGGCQV PIAAYAVLQK ADALAADNDS NDNDNGNNDA GDTLWLRGRV GQEDGSELLK
VDKRQTLTGS QAEQEAQANQ LGIEVAEMLL QAGAGEILSA IYHPE