Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0098 |
Symbol | |
ID | 4034430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 113639 |
End bp | 114676 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637972540 |
Product | porphobilinogen deaminase |
Protein accession | YP_579366 |
Protein GI | 93004929 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA TGCAGCAACC TGCTTTGACT ACCTTAAATA TCGCTACGCG CCAGAGCCCA CTAGCATTAT GGCAAGCTGA GCATATTCGT AATCGATTAC TAGCTTTGTA TCCTGAGATG ACAATTAATC TGCTAAAAAT CGTGACTAAA GGTGACAAAA TTTTGGATAC GCCACTGGCT AAAATTGGCG GCAAAGGTTT ATTTGTTAAA GAGCTTGAGC AAGCACTGTA TGACAAGCAA GCAGATATCG CGGTGCACTC ACTCAAAGAC GTGCCCATGG ATTTACCAGA AGGGTTGACG CTAGGCGTTT ATTGCAAACG TGCTTCACCA ACCGACGCTT TTGTATCGAA TACTTATCAT AGTATCGCTG AGTTGCCACA AGGGGCGGTA GTCGGTACTG CAAGTTTGCG TCGTCAGTGT CAAATCAAAG CTTATCGTCC CGATTTGCAA ATTAAAACCC TACGCGGCAA TGTCGGCACG CGACTAAGCA AGTTAGATGC GGGCGAGTAT GATGCGATTA TTTTGGCGAC TAGTGGTCTA AAGCGCATTG AGCTTGATGC ACGTATTCGT AGTGAGTTAG ATATCAATAT TTGCTTGCCA GCGGTTGGGC AAGGCGCGTT AGCAATTGAA TGTCGTGAAG ATGATGCCGA CGTATTAAAA TTATTGGCAC CACTTAATGA CGACAAAGCT CGTATCCGCT TAATCGCTGA GCGCGCATTA AATCGTCATC TGCAGGGCGG TTGCCAAGTA CCTATCGCCG CTTATGCTGT ATTACAAAAG GCAGATGCAT TGGCTGCTGA TAATGATAGC AATGATAATG ACAATGGTAA CAACGATGCT GGCGATACCT TATGGCTGCG CGGTCGCGTT GGTCAAGAAG ATGGTAGCGA GCTGCTTAAG GTGGACAAGC GCCAGACGTT AACAGGCAGT CAAGCTGAGC AAGAAGCCCA AGCAAACCAG TTGGGTATCG AAGTTGCTGA GATGTTATTG CAAGCTGGTG CTGGTGAGAT TCTATCAGCG ATCTATCATC CTGAATAA
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Protein sequence | MSTMQQPALT TLNIATRQSP LALWQAEHIR NRLLALYPEM TINLLKIVTK GDKILDTPLA KIGGKGLFVK ELEQALYDKQ ADIAVHSLKD VPMDLPEGLT LGVYCKRASP TDAFVSNTYH SIAELPQGAV VGTASLRRQC QIKAYRPDLQ IKTLRGNVGT RLSKLDAGEY DAIILATSGL KRIELDARIR SELDINICLP AVGQGALAIE CREDDADVLK LLAPLNDDKA RIRLIAERAL NRHLQGGCQV PIAAYAVLQK ADALAADNDS NDNDNGNNDA GDTLWLRGRV GQEDGSELLK VDKRQTLTGS QAEQEAQANQ LGIEVAEMLL QAGAGEILSA IYHPE
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