Gene Pcryo_0097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0097 
Symbol 
ID4034429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp112718 
End bp113455 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content45% 
IMG OID637972539 
ProductLytR/AlgR family transcriptional regulator 
Protein accessionYP_579365 
Protein GI93004928 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCG TAGTTTGTGA TGATGAACCA TTAGCTCGTG AACGTTTGGT TAGGATTGTT 
AAAGAGTCAG GTCATGAGGT GGTTGCCCAA GCAAAGACGG GTATCGAAGC CATTAGTGCC
GTAAAATCTC AGCAGCCAGA CATCATATTG CTAGATATTC GTATGCCTGA GATGGATGGC
GTACAGTGTG CGCAAGAGCT TGCTAAGCTG CAACATCCGC CCGCAATCAT CTTTGTGACG
GCCTATGATC ATTATGCCAT TGCCGCTCTA AAAGCCAATG CTATTGGTTA CTTGCTAAAG
CCTGCCAATA AAGATGAGTT GCTCGAAGCC CTAGAAAAAG CCACCAATCT CAATGCGGCG
CAGCTCAATG AGATTCGTAA ACTTGAAAGT CCAACGTCTC GTCCAGTGCG CGAACATATT
GCAGCGCGTA CCCATCGCGG TGTTGAGCTG ATAAAACTCA AAGACATCTA CTATTTTACG
GCAGATCAGA AGTACGTCAA AGTACGGCAC AAGGATGGCA TCGTGCTCAT TGATGACACC
TTAAAAGAGC TTGAGCAAGA GTTTGAAGAC AAGCTGTTCC GGGTACATCG TAACGCTATC
ATCAATATCA AATATTTAGA TTTTTTAGAG ACTTTAGATG CCGGCCAATA TCAGCTACAT
TTTAAAGGAA TTGATGAGAC TTTAGCAGTG AGCCGCCGCC ATTTACCAGG GCTGCGCGAA
AAGATTCAAA ACATTTAA
 
Protein sequence
MRIVVCDDEP LARERLVRIV KESGHEVVAQ AKTGIEAISA VKSQQPDIIL LDIRMPEMDG 
VQCAQELAKL QHPPAIIFVT AYDHYAIAAL KANAIGYLLK PANKDELLEA LEKATNLNAA
QLNEIRKLES PTSRPVREHI AARTHRGVEL IKLKDIYYFT ADQKYVKVRH KDGIVLIDDT
LKELEQEFED KLFRVHRNAI INIKYLDFLE TLDAGQYQLH FKGIDETLAV SRRHLPGLRE
KIQNI