Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0097 |
Symbol | |
ID | 4034429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 112718 |
End bp | 113455 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637972539 |
Product | LytR/AlgR family transcriptional regulator |
Protein accession | YP_579365 |
Protein GI | 93004928 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATCG TAGTTTGTGA TGATGAACCA TTAGCTCGTG AACGTTTGGT TAGGATTGTT AAAGAGTCAG GTCATGAGGT GGTTGCCCAA GCAAAGACGG GTATCGAAGC CATTAGTGCC GTAAAATCTC AGCAGCCAGA CATCATATTG CTAGATATTC GTATGCCTGA GATGGATGGC GTACAGTGTG CGCAAGAGCT TGCTAAGCTG CAACATCCGC CCGCAATCAT CTTTGTGACG GCCTATGATC ATTATGCCAT TGCCGCTCTA AAAGCCAATG CTATTGGTTA CTTGCTAAAG CCTGCCAATA AAGATGAGTT GCTCGAAGCC CTAGAAAAAG CCACCAATCT CAATGCGGCG CAGCTCAATG AGATTCGTAA ACTTGAAAGT CCAACGTCTC GTCCAGTGCG CGAACATATT GCAGCGCGTA CCCATCGCGG TGTTGAGCTG ATAAAACTCA AAGACATCTA CTATTTTACG GCAGATCAGA AGTACGTCAA AGTACGGCAC AAGGATGGCA TCGTGCTCAT TGATGACACC TTAAAAGAGC TTGAGCAAGA GTTTGAAGAC AAGCTGTTCC GGGTACATCG TAACGCTATC ATCAATATCA AATATTTAGA TTTTTTAGAG ACTTTAGATG CCGGCCAATA TCAGCTACAT TTTAAAGGAA TTGATGAGAC TTTAGCAGTG AGCCGCCGCC ATTTACCAGG GCTGCGCGAA AAGATTCAAA ACATTTAA
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Protein sequence | MRIVVCDDEP LARERLVRIV KESGHEVVAQ AKTGIEAISA VKSQQPDIIL LDIRMPEMDG VQCAQELAKL QHPPAIIFVT AYDHYAIAAL KANAIGYLLK PANKDELLEA LEKATNLNAA QLNEIRKLES PTSRPVREHI AARTHRGVEL IKLKDIYYFT ADQKYVKVRH KDGIVLIDDT LKELEQEFED KLFRVHRNAI INIKYLDFLE TLDAGQYQLH FKGIDETLAV SRRHLPGLRE KIQNI
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