Gene Pcryo_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0090 
Symbol 
ID4034216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp102843 
End bp104753 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content45% 
IMG OID637972532 
ProductABC transporter related 
Protein accessionYP_579358 
Protein GI93004921 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTC TATTTCGCTT TTTTGAAAAT CGCCTGCCGG CCTTCCCTGA AACACCGATG 
CCACTACCCT CACCTCGTGA TGGCATGCTA AAGTTTCTGT GGGCGTGCAC CAATGGTTTA
CGCGGCTGGC TACTGCTATT TATGATTTTG TCAGCCGGTA TCGGTATTTA CGAAGCCATG
CTCTTTGCTT GGATTGGAAA TATCGTTGAC TGGCTTGGGG TTTATACCCC GCAAAATCTG
TGGCTAGAAA AAGGCGACAT GCTGCTGCTC ATGCTGGCGG TGATGATTGT CAGCCCATTA
TGGATTGCCT TATCCTCATT TATCCATTTT CAAACCTTGC AAGGGGTATT CCCCATGCAG
ATGCGCTGGC GTTTTCATCA GCGTATGCTT GGTCAATCGA TGCAGTTTTA TCAAGATGAA
TTCTCCGGTC GCGTTTCTGC TAAAGTGATG CAAACCGCAT TGGCAGTACG TGATACCGTT
ATGACAGTTA CTGACATGTT TATGTATGTC GCTGTCTATT TTATTACTTC AGGTATCATT
CTCTTCAATC TTGATAGTTT GCTACTGATT CCCTTTATCG CGTGGTTTGT ATTAGTTTGG
CTTGCGATGT GGTATTTCAT ACCTAAACTC AAACAAACGG CTATTGTACA AGCAGATGCT
CGCGCCTTGA TGACGGGGCG CATTACTGAT GCCTACGCCA ATATTATGAC CGTCAAGCTG
TTTAGTCACT CGCGCCGTGA GCTCAGTTAC GCCAAAAACG CCATGGGGCA GTTTTTGGGT
ACCGTCCATG CACAAATGCG CTGGGTCAGC TATCTTGAGT TTTCAACGCA TTTGATTAGT
GTTGTTTTGG TCAGTAGTAC TGCTGGTATT GGCTTGTATT TATGGCAACA AGAAGCCATT
GGTGTCGGTG CTATTGCTGC TGCAACTGCT ATGGCGCTAC GCTTGAATGG TTTAACGCGC
TGGATTATGT GGCAGACGGC AAGTTTGTTT GAAAGTATCG GTACGGTACA GGACGGTATG
CGTACCTTAT CTGCACCGCA AACCATCATT GACAAACCCA ATGCACCAGC TTTAAAAGTC
ACAGAAGGTC GTATCGTCTT CGATCATGTT GACTTCAGTT ATGAGAATGA CAGCGATGAT
ACAGACAATA ACGATGGTGG AAATTTAAAC GACGGTAACC TATCAGCCAC GTCTACTATC
AAACTTCTCG ATAATTTTTA CTTGGACATC AAACCCGGCG AAAAAATCGG TCTGGTTGGA
CGTTCAGGTG CCGGCAAATC CACCTTGGTC AATCTACTCT TACGCTTCTT TGATGTCGAT
AAAGGTAAAA TCCTCATTGA TGGTCAGGCG ATTGATGAAG TGACCCAAGA GTCCTTACGT
CAGCAAATCG GCATGGTGAC CCAAGATACC TCTTTATTAC ATCGTACCGT ACGCGAAAAT
ATTGCTTATG GTCGTCCTGA TGCTACTGAC GAGCAGATTA TCATCGCAGC AAAACAAGCT
CAGGCATGGG ACTTTATCAA AGATTTATAT GATGATAAAG GCAACATGGG GCTGGATACT
CAAGTTGGTG AACGCGGCGT CAAACTTTCG GGTGGGCAGC GTCAACGTAT TGCCATCTCA
CGTGTTATGC TAAAAAACGC GCCTATTCTA CTGTTAGATG AAGCCACCAG TGCGCTCGAT
TCTGAGATCG AATTTGCAAT TACTGAAAGC CTGAACGATA TTATGACTGG CAAGACAGTT
ATTGCCATCG CCCATCGCTT ATCAACCATT GCTGCTCTTG ATAGACTGGT TGTGATGGAT
AAAGGTCAAA TTATTGAGCA AGGCAGCCAT GATGAACTAT TGAATCTACA TGGTATCTAT
GCACGATTAT GGCATCGCCA AAGCGGCGGC TTCTTAGGTG AAGACAGTTA A
 
Protein sequence
MNALFRFFEN RLPAFPETPM PLPSPRDGML KFLWACTNGL RGWLLLFMIL SAGIGIYEAM 
LFAWIGNIVD WLGVYTPQNL WLEKGDMLLL MLAVMIVSPL WIALSSFIHF QTLQGVFPMQ
MRWRFHQRML GQSMQFYQDE FSGRVSAKVM QTALAVRDTV MTVTDMFMYV AVYFITSGII
LFNLDSLLLI PFIAWFVLVW LAMWYFIPKL KQTAIVQADA RALMTGRITD AYANIMTVKL
FSHSRRELSY AKNAMGQFLG TVHAQMRWVS YLEFSTHLIS VVLVSSTAGI GLYLWQQEAI
GVGAIAAATA MALRLNGLTR WIMWQTASLF ESIGTVQDGM RTLSAPQTII DKPNAPALKV
TEGRIVFDHV DFSYENDSDD TDNNDGGNLN DGNLSATSTI KLLDNFYLDI KPGEKIGLVG
RSGAGKSTLV NLLLRFFDVD KGKILIDGQA IDEVTQESLR QQIGMVTQDT SLLHRTVREN
IAYGRPDATD EQIIIAAKQA QAWDFIKDLY DDKGNMGLDT QVGERGVKLS GGQRQRIAIS
RVMLKNAPIL LLDEATSALD SEIEFAITES LNDIMTGKTV IAIAHRLSTI AALDRLVVMD
KGQIIEQGSH DELLNLHGIY ARLWHRQSGG FLGEDS