Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0061 |
Symbol | |
ID | 4034851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 70007 |
End bp | 70528 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637972501 |
Product | Holliday junction resolvase YqgF |
Protein accession | YP_579329 |
Protein GI | 93004892 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.498043 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGATA GCACTCTTAT AAAAGATAGT ACTGATACTA GCGTTGCTGA GCCAGTGATC AAGCCACACC TTATCTTAGC CTTAGATTAT GGGGTTAAAA AAATGGGCAT GGCACTCGGT AATAGCTTGA CAGAAACGGC GCGTGCCTTT GATATTTTAG CGATGAATAA TGGGCAACCT GATTGGGATA ATCTACTCGG TATTATCAAG GTTTGGGGCG TGGCAAAGGT AGTAGTCGGA CTGCCGTTAA ATATGGACGG TAGCAGCTCT ATGCTGTCAA AACGCGCACA TAAATTTGCC CGTCGTCTGG CACATAGAAT CATGGAGCAG CATTTACCTG TCATCGTATC TCTATGTGAT GAGCGCTTAA CATCGGTCGC CGCGCGTGAG ATAGCATGGG AAAACGGCTG GATTAAACAT GAGCGCGCTC CGATTGATGA TATCTCTGCC TGTATTTTAA TGTCAACCTA CTTTGCTGAT CCTCATAGCA GTATCGCCAT CGACGCCATC AAAGCAGATT AA
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Protein sequence | MVDSTLIKDS TDTSVAEPVI KPHLILALDY GVKKMGMALG NSLTETARAF DILAMNNGQP DWDNLLGIIK VWGVAKVVVG LPLNMDGSSS MLSKRAHKFA RRLAHRIMEQ HLPVIVSLCD ERLTSVAARE IAWENGWIKH ERAPIDDISA CILMSTYFAD PHSSIAIDAI KAD
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