| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0024 |
|---|
| Symbol | |
|---|
| ID | 4034853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 29793 |
|---|
| End bp | 30848 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637972464 |
|---|
| Product | 2-nitropropane dioxygenase, NPD |
|---|
| Protein accession | YP_579292 |
|---|
| Protein GI | 93004855 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00178014 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTAC TGAACACCCT TAATTTGACA TATCCTATTG TTCAAGCGCC GATGGCAGGA
GCAACCACCC CTGAGCTGGC AGCGACTGTC AGTAACTTTG GTGGACTGGG TTCATTGGGA
GCGGGCATGA CGGCGCCAGA CGTTTTAAAT AGTGAAATAA ACACCATTAA ATCGCTCACC
GATCATCCTT TTATGGTCAA TCTGATGGTG TTATCAGAGC ATGAATCTAG TGCTTTGGAT
AGCGAAGTAC CTACTTGGCT AAGCAAGTAC TATCAAGAGA AAAATATCGA ATTTACTCTG
CCGAAGCACC CAGCGCTAAG CTTTGCAGAG CAGCTACAAG TGCTCTATGA CAATCCCGTT
CCTGTCGCCA GTTTTACCTT TGGCATTATC AGCGCTGAGC AGGTGCAGCG TTTGCAAGGT
CTAGGCACAC GGGTCGTCGG TACTGCCAAT CATCCATTGG AAGCAAAAGC ATGGGCAGAG
ATTGGTGCAG ATGCGGTATG CGTGCAAGGG GTCGAAGCGG GTGGGCATCG CGGTGGTTGG
TTGCCGCAAA GTGAAAACGA TCCATTGGGA TTATTGACGC TAATAAGTCA AACGCGTGCC
TGCAACGATA TTCCTTTAAT CGCGGCTGGT GGCATTATGA ACGGACAGGA CATCAAAGCA
GTTCAAACGG CTGGTGCTGA GCTGGCGCAA ATCGGGACGG CATTTTTGAC CACAGATAAA
TGCGCTATCA ATGACATTTA TAAGCAAGCG TTACTCGATG CCAGCCAAGA TAAGCGCAGC
TCTGAGACGC GCTTAACCAG ATTATTCTCA GGGAAACAGG CTCGTGGTTT ATTAAATGAT
TATTTGCATG ATTTTGCTCA ATTTGAGAGC GCGCATGAGC TACCGCCTTA CCCACAATTA
AATGCGATGA CCAAATTTTT GCGTGCCCAT GCAACCAAAA ACCGCGATGC CGAACATCAA
TCTTTATGGG CAGGACAAGG TGTCGCTTTG GTTAGACAAG AGCGCACGGT TGAACTGCTA
GAGCGATTGG TAAGAGAGAG AGAGAGAGAG AGTTAG
|
|---|
| Protein sequence | MTLLNTLNLT YPIVQAPMAG ATTPELAATV SNFGGLGSLG AGMTAPDVLN SEINTIKSLT
DHPFMVNLMV LSEHESSALD SEVPTWLSKY YQEKNIEFTL PKHPALSFAE QLQVLYDNPV
PVASFTFGII SAEQVQRLQG LGTRVVGTAN HPLEAKAWAE IGADAVCVQG VEAGGHRGGW
LPQSENDPLG LLTLISQTRA CNDIPLIAAG GIMNGQDIKA VQTAGAELAQ IGTAFLTTDK
CAINDIYKQA LLDASQDKRS SETRLTRLFS GKQARGLLND YLHDFAQFES AHELPPYPQL
NAMTKFLRAH ATKNRDAEHQ SLWAGQGVAL VRQERTVELL ERLVRERERE S
|
|---|
| |