Gene Nham_3956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3956 
Symbol 
ID4031704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp4330255 
End bp4330770 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content62% 
IMG OID637972319 
Productnuclease (SNase-like) 
Protein accessionYP_579093 
Protein GI92119364 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACGCC AGACCCTGTT CGCAACTGCC CTGCTTGCGC TACCCACCCA CGCCCAACCC 
CTGACAGGTC AAGCATCCGT CGTTGATGGC GACACGCTCG AAATTCACGG GCAGCGCATT
CGCTTGTCGG GTATCGACGC GCCCGAATCT TCTCAACTCT GTCGCGGGGA CGACAGCTTG
CAATATCGCT GCGGTGCCAA GGCGGCGAAT GAGCTTGACG AGCACATCGC GGGCAGGCCC
GTAAGCTGCG AGGGCGTCGG CCGGGATCAG TATGGGCGGC TCGTCGCCGT CTGCTCTGTC
AACGGCGCTG ATCTGGGGGA TTGGATCGTG CGAGCTGGGC TCGCCTTCGA TTGGCCTAGG
TATTCACGCG GCAAATACGC GGCGGCGCAA AAGGAAGCCG AACGAGCCGA ACGTGGTGTT
TGGGCTGGTA GCTACATCGT ACCCTGGGCC TATCGGGCGT GCATTCGCAA GGGCGGTCGG
CCTAGTGGGT GCTCGGATGA GGCGAACGCT CGATAA
 
Protein sequence
MIRQTLFATA LLALPTHAQP LTGQASVVDG DTLEIHGQRI RLSGIDAPES SQLCRGDDSL 
QYRCGAKAAN ELDEHIAGRP VSCEGVGRDQ YGRLVAVCSV NGADLGDWIV RAGLAFDWPR
YSRGKYAAAQ KEAERAERGV WAGSYIVPWA YRACIRKGGR PSGCSDEANA R