Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3956 |
Symbol | |
ID | 4031704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 4330255 |
End bp | 4330770 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637972319 |
Product | nuclease (SNase-like) |
Protein accession | YP_579093 |
Protein GI | 92119364 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATACGCC AGACCCTGTT CGCAACTGCC CTGCTTGCGC TACCCACCCA CGCCCAACCC CTGACAGGTC AAGCATCCGT CGTTGATGGC GACACGCTCG AAATTCACGG GCAGCGCATT CGCTTGTCGG GTATCGACGC GCCCGAATCT TCTCAACTCT GTCGCGGGGA CGACAGCTTG CAATATCGCT GCGGTGCCAA GGCGGCGAAT GAGCTTGACG AGCACATCGC GGGCAGGCCC GTAAGCTGCG AGGGCGTCGG CCGGGATCAG TATGGGCGGC TCGTCGCCGT CTGCTCTGTC AACGGCGCTG ATCTGGGGGA TTGGATCGTG CGAGCTGGGC TCGCCTTCGA TTGGCCTAGG TATTCACGCG GCAAATACGC GGCGGCGCAA AAGGAAGCCG AACGAGCCGA ACGTGGTGTT TGGGCTGGTA GCTACATCGT ACCCTGGGCC TATCGGGCGT GCATTCGCAA GGGCGGTCGG CCTAGTGGGT GCTCGGATGA GGCGAACGCT CGATAA
|
Protein sequence | MIRQTLFATA LLALPTHAQP LTGQASVVDG DTLEIHGQRI RLSGIDAPES SQLCRGDDSL QYRCGAKAAN ELDEHIAGRP VSCEGVGRDQ YGRLVAVCSV NGADLGDWIV RAGLAFDWPR YSRGKYAAAQ KEAERAERGV WAGSYIVPWA YRACIRKGGR PSGCSDEANA R
|
| |