Gene Nham_3887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3887 
Symbol 
ID4029498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp4265150 
End bp4265629 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content60% 
IMG OID637972268 
Producttransposase and inactivated derivatives-like 
Protein accessionYP_579042 
Protein GI92119313 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGACGA CGGAAAATCG CGGGCGCTAC AACCGAAGCA AGCTTCGCTA CCCCAGCGAT 
CTGACGGATG AGGAATGGAA GCTCGTCGAG CCCTTGATCC CGCCGGGCAA GCGCGGCGGC 
GGTAAGCGCA CGGTTATCAT GCGCGAGGTC GTCAACGGGC TGATGTATAT TTTGAGCACG 
GGTTGCCAAT GGAGCGCGAT TCCGAAGGAC CTTCCGCCGA AAAGCACGGT GTACGATTAT 
TTCGACCTGT GGAGTTGGGA TGGCACGCTC AATCGTGTGC ATGAGGTTCT CTACGTGGAG 
TGCCGGGAAC GGGCCTCGCG CGAGGCCAGC CCCACCGCCG CGATCATCGA CAGCCAGAGC 
GTTAAAAGCG CTGAAAAAGG GGGTCCTACG ATCCGCCTGG CTATGATGCC GGCAAGAGTG 
CGCCCTCGAA GGCGCGCATC ATCTATGGAG GAAGGTTCCA TCCGGAGAGT TGTCGATTGA
 
Protein sequence
MWTTENRGRY NRSKLRYPSD LTDEEWKLVE PLIPPGKRGG GKRTVIMREV VNGLMYILST 
GCQWSAIPKD LPPKSTVYDY FDLWSWDGTL NRVHEVLYVE CRERASREAS PTAAIIDSQS 
VKSAEKGGPT IRLAMMPARV RPRRRASSME EGSIRRVVD