| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3732 |
|---|
| Symbol | |
|---|
| ID | 4030067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 4111581 |
|---|
| End bp | 4112066 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637972141 |
|---|
| Product | alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen |
|---|
| Protein accession | YP_578916 |
|---|
| Protein GI | 92119187 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0678] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCA AAGTTGGCGA CCGCCTGCCC GACGCGACCT TCCGCATCAT GACGGATGAC
GGCGTTCAGG TGAAAAGCAC CGGCGACATC TTCAAGGGCA GGAAGGTGGC GCTGTTCGCG
GTGCCCGGCG CCTATACCGG CACCTGCCAC AAACAGCATC TGCCGAGCAT TTTTCTTAGC
GCCCGCGCCA TCAAGGACAA GGGCGTCGAC GAGATCGCGA TCGTCTCCGT CAACGACGTC
TTCGTCATGA ACACCTGGAA GCGCGATACC GACCAGCGCA ACGAGGCGAC CTTCCTCGCC
GACGGCAACG CCGACTTCGC CAGGGCGATC GGCATGGAAT TCGATGCATC CGAAAAGGGC
CTCGGCATCC GCTCCAAGCG CTATTCAATG CTGGTCGAGG ACGGCGTGGT AAAGACGCTC
AATCTTGAAC CGAACCCAGG CAAGGTCGAG GTCTCCGGCG GCGACACGCT GCTGGGACAG
CTTTGA
|
|---|
| Protein sequence | MTIKVGDRLP DATFRIMTDD GVQVKSTGDI FKGRKVALFA VPGAYTGTCH KQHLPSIFLS
ARAIKDKGVD EIAIVSVNDV FVMNTWKRDT DQRNEATFLA DGNADFARAI GMEFDASEKG
LGIRSKRYSM LVEDGVVKTL NLEPNPGKVE VSGGDTLLGQ L
|
|---|
| |