Gene Nham_3729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3729 
Symbol 
ID4030063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp4108834 
End bp4109616 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content67% 
IMG OID637972138 
ProductABC transporter related 
Protein accessionYP_578913 
Protein GI92119184 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAG CCGTCGTTCT CATCGCATCG TCGCTATCGG CTAATCTTGG AAAGAGAGTT 
GTCCTGAGCG ACATTTCGCT GTCGCTCCCA GGCGGATGCC TTGTCGCGCT GGTCGGGCCG
AATGGCGCCG GTAAGACCAC GTTGCTGCGG GCGCTGGCGG GCCTGCTGCC ATCGGAAGGG
ACCATCGAGG TTTGCGGCGA CGCGCTGCCA TCGCTCACCC TTCGAGAGCG CGCGCGCCGT
TTCGCCTACC TGCCGCAAGG CCATCAGATG CATTGGCCGT TGCCGGCGAG GGATATCGTG
GCGCTTGGCC GGTACCCGCA CGGCGCGGTC GATCCGGCGC GGCTGACGGA ACAAGATGCC
GCGGCGGTGA TGCGGGCGAT GCAGGCGACC GACGTGGTAA GTTTAAGCGA TCGTCGCGTG
ACGGAGTTGT CCGGCGGCGA GCGCGGCCGG GTGGCGCTGG CGCGGGTGCT GGCCGTGGAA
GCGCCAGTGC TGCTGGCCGA CGAGCCGACC GCATCGCTCG ATCCGCGCTA TCAGATCGAG
GTCGTGACCA GACTGCGGAC CGCGGCCGAC AGTGGGGTGC TGGTCATCGT GGTGACGCAC
GATCTCGGGC TCGCGGCGCG GTTTGCGGAT ATCGTTCTCG TGCTGTCCGA CGGGCGCCTG
GTATCGCAGG GACCGCCTGC CGGCGCGCTC TCGGAGACCG TCATCGCCGA CGTCTTTCGC
GTCAGGACCT ATCGGGCCGA CTATCAATGC GAAACCGTGA TCGTGCCGTG GGCGGAGGTG
TGA
 
Protein sequence
MSEAVVLIAS SLSANLGKRV VLSDISLSLP GGCLVALVGP NGAGKTTLLR ALAGLLPSEG 
TIEVCGDALP SLTLRERARR FAYLPQGHQM HWPLPARDIV ALGRYPHGAV DPARLTEQDA
AAVMRAMQAT DVVSLSDRRV TELSGGERGR VALARVLAVE APVLLADEPT ASLDPRYQIE
VVTRLRTAAD SGVLVIVVTH DLGLAARFAD IVLVLSDGRL VSQGPPAGAL SETVIADVFR
VRTYRADYQC ETVIVPWAEV