| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3703 |
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| Symbol | |
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| ID | 4030572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 4074468 |
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| End bp | 4076297 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637972113 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_578889 |
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| Protein GI | 92119160 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTCTG AGAACCGCAA TACCATCATC GCCATCGTTC TGTCGGGCCT CATCCTGATC
GCCTGGCAGT ATTTCTACAA CATCCCGCAG ATGGAAAAGG ATCGCGCCGC GCAGCAGGCG
CAAAGCCAGA CGGCAAAGTC TCCGACCGAG CCGACGCCAA ATTCGCCCAA GCCCGATCAC
CCTGCGGCGG AGTCCGTGGT TGCCCGGGGC GTTGCCATTG CGACCACGCC GCGCGTCAAG
ATCGACACCC CGCGCCTGAG CGGAAGCATC TCGCTGAAGG GCGCGCGCAT CGATGATCTC
CTGCTGACCA AGTTCCGCGA GACCGTCGAT CCCGCTTCAC CCGCGATCGA GCTGTTTTCG
CCCTCCGGCA CGACCACTCC GTATTATGCC GAATTCGGGT GGGTTGCGGC TACCGGATCG
ACCGCACGGG TGCCGGACCA GAATACGGTG TGGCAGCAGG AAGGGTCGGG CGCACTGACA
CAGTCCACCC CGGTCACGCT GAAATACGAC AATGGCGAAG GGCTGACGTT CCGTCGCACG
ATCGCGGTGG ACGACCACTA TCTGTTCACG ATCAAGGATG AGGTCACGAA CGCCGGCGGT
GCGCCGGTGA CGTTGTATCC GTTCGCGCTG ATTTCACGCC ATGGCACGCC GGCAGTCTCC
GGCTACTACA TCCTGCACGA AGGTCTCATC GGATATCTCG GCGATCAGAA GCTGCAGGAA
TATTCCTATA AGAAGATCGA CGAAGCCAAG TCGGTCAGCT TCAAGGTCAC CAACGGCTGG
CTCGGCATCA CCGACAAATA TTGGGCCGCG GCCCTGCTGC CCGACACCAG CGCGCAGCTG
CAGGCGCGCT TCTCGTCCAA TGAGTCAGGT TCGGTCAAGA CCTACCAGGC CGACTATCTG
GAGGATGCGC AGACCATCCC CGTCGGCGGC ACCGGTTCGG TCAACACGCG CCTGTTCGCC
GGCGCCAAGG AAGCCGGCGT TGTCGGCATC AACTTTCCGT TCGTGGAACT CGGCGGCTAC
AACAAGCAAC TCGGCCTCAA CCATTTCGAC CTGCTGATCG ACTGGGGCTG GTTCTACTTC
ATCACCAAGC CGATGTTCCT CGCGCTGGAT TTCTTCTTCC ATGTCTTCGG CAATTTCGGC
ATCGCGATCC TGTTTGTGAC GGTCCTGATC AAGGCGATCT TCTTCCCGCT TGCCAACAGG
TCCTACGCCT CGATGGCGAA GATGAAGGCG GTCCAGCCGC AGATCGCCGC GTTGAAAGAG
CGTTTTCCCG ACGACAAGAT GAAGCTGCAG CAGGAGATGA TGGAAATCTA CAAGAAGGAG
AAGATCAACC CGATCTCGGG CTGTCTTCCG ATGGTCTTGC AGATTCCGGT ATTCTTCTCG
CTCTACAAGG TGCTGTTCGT GACCATCGAA ATGCGTCACG CGCCATTCTT CGCCTGGATC
AAGGACCTGT CTGCGCCCGA TCCGACCCAC ATCTTCAATC TGTTCGGGTT GCTGCCCTAC
GATCCGTCGG CGGTGCCGTT GCTCGGTCCC TATCTCGCGA TCGGCGCGTG GCCGATCATC
ATGGGCATCA CGATGTGGTT CCAGATGAAG CTGAACCCGA CGCCGCCGGA CCCGACCCAG
AAGCTCATCT TCGACTGGAT GCCGGTGATC TTCACCTTCA TGCTTGCGGC GTTCCCGGCC
GGCCTCGTGA TCTACTGGGC CTGGAACAAC ACGCTGTCGG TGATCCAGCA GAGCTACATC
ATGCGCCGCA ACGGCGTGAA GGTGGAACTG CTCAACAACG TGAAGTCAGT CTTCCGCCGC
AAATCCTCCG ACAAGCCGGC GAAGACGTAG
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| Protein sequence | MMSENRNTII AIVLSGLILI AWQYFYNIPQ MEKDRAAQQA QSQTAKSPTE PTPNSPKPDH
PAAESVVARG VAIATTPRVK IDTPRLSGSI SLKGARIDDL LLTKFRETVD PASPAIELFS
PSGTTTPYYA EFGWVAATGS TARVPDQNTV WQQEGSGALT QSTPVTLKYD NGEGLTFRRT
IAVDDHYLFT IKDEVTNAGG APVTLYPFAL ISRHGTPAVS GYYILHEGLI GYLGDQKLQE
YSYKKIDEAK SVSFKVTNGW LGITDKYWAA ALLPDTSAQL QARFSSNESG SVKTYQADYL
EDAQTIPVGG TGSVNTRLFA GAKEAGVVGI NFPFVELGGY NKQLGLNHFD LLIDWGWFYF
ITKPMFLALD FFFHVFGNFG IAILFVTVLI KAIFFPLANR SYASMAKMKA VQPQIAALKE
RFPDDKMKLQ QEMMEIYKKE KINPISGCLP MVLQIPVFFS LYKVLFVTIE MRHAPFFAWI
KDLSAPDPTH IFNLFGLLPY DPSAVPLLGP YLAIGAWPII MGITMWFQMK LNPTPPDPTQ
KLIFDWMPVI FTFMLAAFPA GLVIYWAWNN TLSVIQQSYI MRRNGVKVEL LNNVKSVFRR
KSSDKPAKT
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