Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3697 |
Symbol | |
ID | 4030683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 4069361 |
End bp | 4070596 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637972107 |
Product | succinyl-diaminopimelate desuccinylase |
Protein accession | YP_578883 |
Protein GI | 92119154 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.891893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTTTAA CATTCGCTCA AGAGGCGCCA CCGAAACATT ATGCGAATGT TGGAATCGGA CCACTGGTGG CCACCGACGC TCTCTCCATC GCTCGCGACC TCGTCCGCTG CCCGTCGGTG ACGCCGGCCG ACGCAGGCGC TCTCGGCGTG CTTGAGAAGC TGCTCGGCGA TGCCGGTTTC GAGGTTCACC GCGTCACCTT CAGCGAACCC GGCGCCGCCG ACATCGACAA TCTGTATGCC CGTATCGGCG CCACCGGCCC CCACATCGCG TTCGCCGGCC ATACCGATGT CGTGCCTCCC GGTGACGAGT CGGCATGGAC CCATGGCGCG TTTTCCGGCG AGGTGAAAGA CGGCTTCCTC TACGGGCGCG GCACCGTGGA CATGAAGGGC GGCATCGCCT GCAGCGCCGC CGCCACGCTG GAATATCTGG AGGCGCACGG CGGTCGGCCG GGGAAAGACG GCAACGGCTC GATCTCGTTT CTGATCACCG GCGACGAGGA AGACATCGCC GTCAATGGCA CCGTCAAGCT GATGCAATGG GCGGCCGCGC GCGGTGAAAA ATTCGATCAC TGCGTGCTCG GCGAGCCCAG CAATGTTGCC GAACTCGGCG ACTGCATCAA GATCGGCCGC CGTGGCTCGC AGTCCGGCAC GCTGTATGTC GAGGGCGTGC AGGGCCACGT CGCTTATCCG CACCGCGCGT CAAATCCGAT TCCGGACATC GCCGCGCTGA TCACCGCGCT CGTCAGCGAG CCGTTGGATC AGGGCAGCGC GCAGTTCCAG CCGTCGAATC TGGCGTTCAC CTCCGTCGAT GTCGGCAATC CTGCGAACAA TGTGATTCCC GGACAGGCGC GGGCGAAATT CAACGTCCGC TTCAACGATC ATCATAATCA GGAATCGCTC CGTGCGCTGA TCGAAGCGCG TGTCGCCAAG GTCTCGGGCA ATCGCATTCG GACCCGGATC GTGTGGGAGC CCTCGAATGC CGATGTGTTC GTGACCAGAC CGGGCCCGTT CACCGATCTC GTGGTCGCGG CGATCGAGGA GGTGACCGGC CGCAGACCGG AGCTGAACAC CGGCGGCGGC ACGTCGGATG CGCGTTTCAT CAAGGACTAC TGCCCGGTGA TCGAATTCGG CCTGGTCGGA CAGACCATGC ACCAGATCGA CGAGCGCGCG CCGGTAGCCG ATCTCGAAAA GCTGACCCGT ATCTACCACG GCGTACTGGA TCGCTATTTC GCATGA
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Protein sequence | MILTFAQEAP PKHYANVGIG PLVATDALSI ARDLVRCPSV TPADAGALGV LEKLLGDAGF EVHRVTFSEP GAADIDNLYA RIGATGPHIA FAGHTDVVPP GDESAWTHGA FSGEVKDGFL YGRGTVDMKG GIACSAAATL EYLEAHGGRP GKDGNGSISF LITGDEEDIA VNGTVKLMQW AAARGEKFDH CVLGEPSNVA ELGDCIKIGR RGSQSGTLYV EGVQGHVAYP HRASNPIPDI AALITALVSE PLDQGSAQFQ PSNLAFTSVD VGNPANNVIP GQARAKFNVR FNDHHNQESL RALIEARVAK VSGNRIRTRI VWEPSNADVF VTRPGPFTDL VVAAIEEVTG RRPELNTGGG TSDARFIKDY CPVIEFGLVG QTMHQIDERA PVADLEKLTR IYHGVLDRYF A
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