Gene Nham_3687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3687 
Symbol 
ID4030673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp4059166 
End bp4059777 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content57% 
IMG OID637972099 
Productpolyhydroxyalkanoate synthesis repressor PhaR 
Protein accessionYP_578875 
Protein GI92119146 
COG category[S] Function unknown 
COG ID[COG5394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAAT CAGAGACACC AACGACAATC AAGAAATATG CAAACCGGAG ACTCTATAAT 
ACCGGCACCA GCACCTATGT GACGCTCGAA GATCTCGCGA CGATGGTCAA GCAGGGCGAG
GATTTCCTCG TTTTCGATGC AAAGACCGGC GACGACATCA CCCGCTCGGT GCTGGCGCAG
ATCATTTTCG AGCAGGAAAA CAAGGCCGGA CAGAATCTGC TCCCGACCAC GTTCCTGCGG
CAGCTGATCC GTTTCTATGG CGACAGCATG CAGATGGTGG TGCCGAAATA TCTCGAACGC
TCGATCGACA TGCTGACCCG CGAGCAGGAG AAGTTTCGCA AGCAGATGAC CAGCACCTTC
AGCGGCACCC CCTTCGCGCC GCTCGAAGAG CATGTCCGCC GCAACATGGA ATTGTTCGAA
CGCACATTCT CGATGTTCAA GCCGTTCGTG CCGCCGCGCA GTGGGACCGC CGCGCCCGAA
CCGGAGAAAA CGCCTGACGC CTCAAATGCA GGCGACAATA ATGCCGGCGA CAATATCGAG
GATCTTCGCC GTCAGATGAA AGAGATGCAG GAGCGCCTCG AGCGGATGTC GAAAGAGCCG
AAGAAGGAAT AG
 
Protein sequence
MAKSETPTTI KKYANRRLYN TGTSTYVTLE DLATMVKQGE DFLVFDAKTG DDITRSVLAQ 
IIFEQENKAG QNLLPTTFLR QLIRFYGDSM QMVVPKYLER SIDMLTREQE KFRKQMTSTF
SGTPFAPLEE HVRRNMELFE RTFSMFKPFV PPRSGTAAPE PEKTPDASNA GDNNAGDNIE
DLRRQMKEMQ ERLERMSKEP KKE