Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3663 |
Symbol | |
ID | 4029883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 4034208 |
End bp | 4037108 |
Gene Length | 2901 bp |
Protein Length | 966 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637972075 |
Product | ribonucleotide-diphosphate reductase subunit alpha |
Protein accession | YP_578851 |
Protein GI | 92119122 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCTCG CAACCGAAGC TGCGCGTGCC GAACGTCCGT CTTTGCCTGC TGCGGCCGCG ATGCCGTCCA GCGAACCCGC GTATCAGGTC ATCCGACGCA ACGGGTCGGT ATCGCCGTTC GATTCCTCGA AGATCGCCGT CGCGTTGACC AAGGCGTTTC TCGCGGTCGA GGGCAACAGC GCCGCTGCTT CGCGCCGGGT CCACGACATC GTCACCGAGC TGACCGACCA GATCGTCGCC AGCCTGACGC GGCGCTCCGA CGCGGGCCGC ACCTTCCACA TCGAGGATAT TCAGGATCAG GCCGAACTCG CGCTGATGCG GAGCGCGCAT CACAAGGTCG CGCGCGCCTA CGTGCTCTAT CGCGAGGAGC GCGCACGCGA ACGGGCCAAG GCGCAGGAGT CGAATGCAAA GAAGAGCAAC GCGGCAGCCG CGACGCCGGC GCTGCGGATG AAGTCGGTCG ACGGGTCGAT GGCGCCCCTC GACACCAGGC GCCTCGCCGC CGTGGTGGAG GAGGCCTGTG CTGGACTTGA GGGTGTCTCG GCCGAGGCCA TTCTGACCGA AACCCATCGC AACCTTTATG ACGGCATCAG CGCGGATGAG TTGGCGTTGG CGCCGATCCT CGCAGCGCGC ACGCTGGTCG AGACCGACCC GGACTACGCC AAGGCGAGCG CGCGCCTCCT GCTCGACAAG CTGCGCCGCG AGGCGTTGAG CCTCATTGCC GGGCGACCGG AGCAGGCGAC CCAGGCGGAA ATGACGGGAC GCTACGCGGA GTATTTCCTT GGCTATGTGC AGACCGGCAT TGAAAACGAA CTGCTCGATC CCGAGATCGG CCGCTTCGAC CTCGACCGAC TTGCAGCCGC ACTGAAGCCG GAGCGCGACC TCCAGTTCGA CTATCTCGGA TTCCAGACCC TTTACGACCG TTACTTCCTG CATGTTCGCG GCACCCGTTT CGAACTGCCG CAGGCGTTCT TCATGCGCGT TGCCTGCGGC CTCGCGCTCC GGGAAATCGA CCGGGAAGAC AAGGCGATCG CGTTCTACAA TCTGCTCTCG TCGTTCGACT TCATGGCCTC GACGCCGACG CTGTTCAACG CCGGGACGCA GCGCGCCCAG CTATCATCCT GCTTCCTCAC CACCGTCGCC GACGACCTCG ACGGCATCTT CAAGGCGATC AAGGACAACG CGCTGCTCTC GAAATATGCC GGCGGCCTCG GCAACGACTG GACGCGGGTG CGCGGGCTCG GCGCGCACAT CAAGGGCACC AACGGGGAAA GCCAGGGCGT GGTGCCGTTC CTGAAGGTCG CGAACGACAC CGCGATCGCA GTCAACCAGG GCGGCAAGCG CAAGGGCGCT GTGTGCGCCT ACCTTGAGAC ATGGCACATC GACATCGAGG AATTTCTCGA TCTGCGGAAA AACACCGGCG ACGACCGCCG CCGCACCCAC GACATGAATA CCGCCAACTG GGTGCCGGAT CTTTTCATGC AGCGGGTCGA GGAGGATGGC GTGTGGACGC TGTTCTCTCC GAACGAGACG CCGGACCTCC ACGATCTCAC CGGCAAGGCC TTCGCAGAAC GCTACGCCCA CTATGAAGGG AAGGCCGCGC GCGGCGAGAT GCGGGTGACG AAGCAGGTTC GCGCCGTCGA CCTGTGGCGG CGGATGCTGA CCATGCTGTT CGAGACCGGA CATCCCTGGA TCACCTTCAA GGATCCGTGC AACCTGCGCT CGCCGCAACA GCATTGCGGT GTCGTGCATT CCTCAAATCT CTGCACCGAG ATCACGCTCA ACACGTCGAA CACCGAGGTG GCGGTGTGCA ATCTCGGCTC AGTCAATCTC GTCAACCACC TGCACGACGG CAAGCTCGAC CATGCGCACC TCGCGCGTAC CGTGAAGACC GCGATGCGGA TGCTCGACAA CGTGCTGAAC GTGAACTTCT ACACGATCCC GGAGGCGCGG ACCTCGAACC TGCGACACCG GCCGGTCGGA CTCGGCCTCA TGGGCTTTCA GGATGCGCTC AACATCCTGC GGCTGCCCTA TGCCTGCGAT GAAGCCGTGT CCTTCGCGGA CGAGAGCATG GAGGCGATTT CGTACTGGGC CATCTCCGGC TCGGTCGATC TCGCGGCCGA GCGTGGCCGC TATCCCTCGT ATCAGGGGTC GCTGTGGTCG AAGGGCATCC TGCCGCTCGA TTCGCTTGCG CTCGTCGATG AAGCGCGCGG CGCGCCGATC GACCTCGACC GTTCCAGCCG TCTCGACTGG GAGGCGCTGC GCCAGCGCGT CATGACCGTC GGCATGCGCA ATTCGAACTG CATGGCGATC GCGCCGACCG CGACGATCTC CAACATCTGC GGCGTCTCGC AATCGATCGA GCCCGCCTAT CAGAACCTCT ACGTCAAATC CAACATGTCC GGCGATTTCA CCGTGGTGAA CGCGCATCTC GTGCGCGATC TCAAGGCGCG CGGGCTATGG GACGAGGTGA TGATCTCGGA CCTCAAATAC TTCGACGGCG GCCTGAGCCG GATCGACCGC GTCCCCGACG ATCTCAAGGC GCTCTATGCC ACCGCCTTCG AGATCGACTC GGCCTGGCTG ATCGACGCCG CGGCGCGCCG GCAGAAATGG ATCGACCAGG CGCAGTCGCT CAACCTCTAC ATCGCCGATC CGAGCGGGAA GAAGCTCGAC GCGCTCTATC GCCATGCCTG GAAGCGCGGC CTCAAGACGA CCTATTACCT GCGCTCGCGC TCGGCGACCC ACGTCGAGAA ATCCACCCTG AAAGTCACCG ACGGCAAACT CAACGCGGTC TCGGCCTCGG TATCGACAGC ACCCTTGAAT GGTCACGCCG CCAGCGTCGC CGAGAGCGAC GGCTGGAAAG CCTGCCGGAT CGACGACCCC ACCTGCGAAG CGTGTCAGTA A
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Protein sequence | MSLATEAARA ERPSLPAAAA MPSSEPAYQV IRRNGSVSPF DSSKIAVALT KAFLAVEGNS AAASRRVHDI VTELTDQIVA SLTRRSDAGR TFHIEDIQDQ AELALMRSAH HKVARAYVLY REERARERAK AQESNAKKSN AAAATPALRM KSVDGSMAPL DTRRLAAVVE EACAGLEGVS AEAILTETHR NLYDGISADE LALAPILAAR TLVETDPDYA KASARLLLDK LRREALSLIA GRPEQATQAE MTGRYAEYFL GYVQTGIENE LLDPEIGRFD LDRLAAALKP ERDLQFDYLG FQTLYDRYFL HVRGTRFELP QAFFMRVACG LALREIDRED KAIAFYNLLS SFDFMASTPT LFNAGTQRAQ LSSCFLTTVA DDLDGIFKAI KDNALLSKYA GGLGNDWTRV RGLGAHIKGT NGESQGVVPF LKVANDTAIA VNQGGKRKGA VCAYLETWHI DIEEFLDLRK NTGDDRRRTH DMNTANWVPD LFMQRVEEDG VWTLFSPNET PDLHDLTGKA FAERYAHYEG KAARGEMRVT KQVRAVDLWR RMLTMLFETG HPWITFKDPC NLRSPQQHCG VVHSSNLCTE ITLNTSNTEV AVCNLGSVNL VNHLHDGKLD HAHLARTVKT AMRMLDNVLN VNFYTIPEAR TSNLRHRPVG LGLMGFQDAL NILRLPYACD EAVSFADESM EAISYWAISG SVDLAAERGR YPSYQGSLWS KGILPLDSLA LVDEARGAPI DLDRSSRLDW EALRQRVMTV GMRNSNCMAI APTATISNIC GVSQSIEPAY QNLYVKSNMS GDFTVVNAHL VRDLKARGLW DEVMISDLKY FDGGLSRIDR VPDDLKALYA TAFEIDSAWL IDAAARRQKW IDQAQSLNLY IADPSGKKLD ALYRHAWKRG LKTTYYLRSR SATHVEKSTL KVTDGKLNAV SASVSTAPLN GHAASVAESD GWKACRIDDP TCEACQ
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