| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3643 |
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| Symbol | |
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| ID | 4031367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 4010946 |
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| End bp | 4012550 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637972055 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_578831 |
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| Protein GI | 92119102 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATCCG CTGCAGCGAC GAACGATTCT CACGCCCACG CTCATCCCAC CGGCTGGCGG
CGCTACGTGT ATTCGACGAA CCACAAGGAT ATCGGCACGA TGTACTTCGT GTTCGCTATC
TGCGCGGGAT TGATTGGCGG GACCTTCTCG GTCTTGATGC GGATGGAATT GCAGGAGCCG
GGTCTCCAGA TTTTCTCCAA CCCGCATGCC TACAACGTAT TCCTCACAGG CCATGGCCTG
ATCATGATCT TCTTCACGCT GATGCCGGCG CTGATGGGAG GGTTCGGCAA CTGGATGGTG
CCGCTGATGA TCGGAGCGCC GGACATGGCG TTTCCGCGCA TGAACAACAT TTCATTCTGG
CTGCTGCCGG CGTCATTTAC ACTGTTCATC ATTTCGCTGT TCGTCGGAGG CGAGCCCGGC
ACGGATGGTG CCGGCACCGG CTGGACGCTC TATGCGCCGC TGTCGACCAG CGGTCATCCG
GGTCCGTCGG TGGATTTCGT GATTCTCTCG CTGCATCTCG CCGGAGCCTC TTCGATCCTC
GGCGCAATCA ATTTCATCAC CACGATTTTC AATATGCGCG CGCCGGGCAT GACCATGCAC
AAGATGCCGC TGTTTGCATG GTCGGTTCTG GTGACGGCAT TCCTGCTCCT GTTGTCGCTT
CCGGTGCTCG CCGGCGCGAT CACGATGTTG CTGACCGATC GAAATTTCGG AACTACGTTC
TTCGCTCCCG AAGGTGGCGG CGATCCGGTG CTGTATCAAC ACCTGTTCTG GTTCTTCGGT
CACCCCGAAG TCTACATCAT GATCCTGCCC GGCTTTGGAA TCATCAGCCA TGTGATCTCG
ACCTTCTCGA AGAAGCCGAT CTTCGGTTAC CTCGGAATGG TCTATGCCAT GATTGCGATC
GGGTTCATCG GCTTCGTGGT CTGGGCCCAT CACATGTACA CCGTCGGCAT GTCGAGCACG
GCCCAGGCTT ACTTTGCTCT CGCCAGCATG GTGATCGCGG TGCCGACCGG CGTGAAGGTG
TTCTCGTGGG TCGCCACCAT GTGGGGCGGC TCGATAAGGT TCAAAACGCC GATGTTGTGG
GCGACCGGCT TCGTGCTTGT GTTCACGATC GGTGGCGTCA CCGGTGTGGT GCTCGCCAAT
CCGGGCGTCG ATCGGGTCTT GCAAGACACC TACTACGTCG TTGCACATTT CCACTATGTG
CTGTCTCTCG GCGCGGTGTT CGCCATCTTT GCCGGCTGGT ATTACTGGTT TCCGAAGATT
ACCGGATACA TGTATTCGGA GTTTTTCGGC AAGCTGCACT TCTGGCTTAC GCTGATCGGC
GTCAATCTGG CTTTCTTCCC GATGCACTTC CTAGGTCTGG AGGGAATGCC ACGACGCGTC
GCCGATTATC CGGATGCATT TGCCGGCTTC AACCACATCG CATCAATCGG ATCCTATATA
TCGGCAGCGG GCACGATCGT GTTTGTCATC GGCATGATCC ATGCCTTCGT TCGCAAGGAG
AAGGCTGAGG CCAATCCCTG GGGGACCGGT GCGACCACAC TTGAATGGAC GCTGTCGTCG
CCGCCGCCGT TTCATCAATT CAACGTTTTG CCGCGTGTGG AGTGA
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| Protein sequence | MISAAATNDS HAHAHPTGWR RYVYSTNHKD IGTMYFVFAI CAGLIGGTFS VLMRMELQEP
GLQIFSNPHA YNVFLTGHGL IMIFFTLMPA LMGGFGNWMV PLMIGAPDMA FPRMNNISFW
LLPASFTLFI ISLFVGGEPG TDGAGTGWTL YAPLSTSGHP GPSVDFVILS LHLAGASSIL
GAINFITTIF NMRAPGMTMH KMPLFAWSVL VTAFLLLLSL PVLAGAITML LTDRNFGTTF
FAPEGGGDPV LYQHLFWFFG HPEVYIMILP GFGIISHVIS TFSKKPIFGY LGMVYAMIAI
GFIGFVVWAH HMYTVGMSST AQAYFALASM VIAVPTGVKV FSWVATMWGG SIRFKTPMLW
ATGFVLVFTI GGVTGVVLAN PGVDRVLQDT YYVVAHFHYV LSLGAVFAIF AGWYYWFPKI
TGYMYSEFFG KLHFWLTLIG VNLAFFPMHF LGLEGMPRRV ADYPDAFAGF NHIASIGSYI
SAAGTIVFVI GMIHAFVRKE KAEANPWGTG ATTLEWTLSS PPPFHQFNVL PRVE
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