Gene Nham_3640 details

Gene Information

• Locus tag: Nham_3640
• ID: 4031364
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 4007265
• End bp: 4007717
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637972052
• Product: biopolymer transport protein ExbD/TolR
• Protein accession: YP_578828
• Protein GI: 92119099
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0848] Biopolymer transport protein
• TIGRFAM ID: [TIGR02803] TonB system transport protein ExbD, group 1

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGCGTTT CGCTTCAGCA AGCATCGTCC GAGGACGAGA TCGCGCCGGT CAGCGACATC 
AACGTGACGC CGTTCATCGA CGTCATTCTC GTGCTGCTGA TTATCTTCAT GATTGCCGCG 
CCGCTGGCGA CGGTCGACAT TGCCGTCGAT CTGCCGGCAT CGACGGCGAC AAAACAGCCC 
CGGCCCGACA AACCGGTCTA CGTCACCATG AAGGCCGACC GGACGCTCGC CGTCGGCGAA 
AACCCGATCT CGCGCACCGG TCTGGCCGGC TCTCTCGACG CCGTCACGTC GTCGGATCGC 
ACCAAGCGGC TGTTCGTCCG CGCCGACAAG ACCATCCCTT ACGGCGAGGT GATGACGTTG 
ATGAACGATC TGCGAGCTGC GGGCTATCTG AAGATTGCGC TGGTCGGACT TGAGTCGGTG 
GGCGGGGCGC AATCCGCCGG AGCCGCGAAA TGA 

 

Protein sequence

MGVSLQQASS EDEIAPVSDI NVTPFIDVIL VLLIIFMIAA PLATVDIAVD LPASTATKQP 
RPDKPVYVTM KADRTLAVGE NPISRTGLAG SLDAVTSSDR TKRLFVRADK TIPYGEVMTL 
MNDLRAAGYL KIALVGLESV GGAQSAGAAK