| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3615 |
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| Symbol | |
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| ID | 4030384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3980728 |
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| End bp | 3982200 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637972026 |
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| Product | Alpha,alpha-trehalose-phosphate synthase |
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| Protein accession | YP_578803 |
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| Protein GI | 92119074 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0254588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACCTCG TTGTCGTTTC GAATCGGGTG GCGCGCGCGC GGGCCAACGA GCCCTTGACG
GGCGGCCTTG CGGCGGCGTT GTTGCCGGTC GTTGAGAAAT CGGGCGCAAT TTGGGTAGGG
TCCAGCGGTC GTGTGCGCGA CGGGCTGCAC AAGGATTCAT TTGCAGAAGT TCAAGCCCTG
GGCGCCGGAG CGCTGGCGTT ACTCGATCTG CCCGCGGCGC ATTACGGCGG GTATTATGAA
GGCTTCGCCA ACTCGGCGCT GTGGCCGGCG CTTCACTCCC GATCCGATCT GATTCACGTG
TCGCGGGACG ACTATCAGTC GTACCGCGAG GTCAACGCCT TCATGGCGCG GGCCCTGATG
CGCTTCCGCA AACCGGACAC CGCCTTCTGG ATTCAGGACT ATCACTTTCT GTCGCTGGGC
GCCGAACTGC GCGATCTCGG CGTCCGTCAT CCGATCGGCT TCTTCCTGCA TACGCCGTGG
CCGACCCGCG CCATCATCGG CGCCGTTCCG CATCATCGCG ACCTGGTCGA GGCGATGCTG
GCTTACGATC TGATCGGATT CCAGACCGAC GACGACTGCG AAAATTTTCT CGGCTATCTT
CAATCCGAAC TCGGCCTCAA GATCGAGGAC GGCGTTGTGA CCTCGCGTCA CGGCAAGTCG
CGATGCGCCG TATTTCCGAT CGGGATCGAT GTGGAGAAGT TCGCGTTGCA GGCCGCCAAG
GCATCCTCGC ATCCGGACGT CTCGCGGCTG CGGCGCAGCC TGCACGGAGA GCAACTGGCG
ATCGGCGTCG ACCGCCTGGA TTATTCGAAG GGACTGGTGA ATCGGATCAA TGCTTTCGAC
CGGATGCTGA CCTCGCAACC CGCGCTGAAG CGCACCGTGA CGCTGTTGCA GATTGCGACC
CCCTCCCGCG GCACCATCGA GGCCTACGGC AACCTGCAGA GCGAACTGGC GAAACTCGTC
AGCGACGTCA ATGGCCGTCA CGGCGAAACC GACTGGATGC CGATCCGCTA CCTCAACCGG
GGATACAGCC AGACCGTGCT GGCCGGCCTC TATCGCACGG CGCGCGTGGG CGTGGTGACA
CCGCTGCATG ACGGAATGAA TCTCGTCGCC AAGGAATATG TCGCCGCGCA AAATCCTGCC
GATCCGGGCG TGCTGGTATT GTCCAAATTC GCAGGCGCGG CGAACGAGCT ACAGACAGCG
CTCCTTGTTA ACCCGCATGA AATCGACGGG ATGGCGCGCG CCATCGCCAC CGCGTTTTCG
ATGCCACTGA CGGAACGCAG GATGCGCTGG GAAGCCATGA TGCGGAAGCT GCGCGCCGGC
ACCATCCAGC AGTGGTTTGC GGATTTTTCC GACGCGCTCG AGGACGCGCA GGCGTCCAAC
AGGACGGTCG TAAGCGAAAG CGTCGCTGTG GAATCGCCGA AACCATGGCC GCTGCACTTG
GTCGGCTCGC GTAGCGGCGC TGGTATTCAC TAG
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| Protein sequence | MNLVVVSNRV ARARANEPLT GGLAAALLPV VEKSGAIWVG SSGRVRDGLH KDSFAEVQAL
GAGALALLDL PAAHYGGYYE GFANSALWPA LHSRSDLIHV SRDDYQSYRE VNAFMARALM
RFRKPDTAFW IQDYHFLSLG AELRDLGVRH PIGFFLHTPW PTRAIIGAVP HHRDLVEAML
AYDLIGFQTD DDCENFLGYL QSELGLKIED GVVTSRHGKS RCAVFPIGID VEKFALQAAK
ASSHPDVSRL RRSLHGEQLA IGVDRLDYSK GLVNRINAFD RMLTSQPALK RTVTLLQIAT
PSRGTIEAYG NLQSELAKLV SDVNGRHGET DWMPIRYLNR GYSQTVLAGL YRTARVGVVT
PLHDGMNLVA KEYVAAQNPA DPGVLVLSKF AGAANELQTA LLVNPHEIDG MARAIATAFS
MPLTERRMRW EAMMRKLRAG TIQQWFADFS DALEDAQASN RTVVSESVAV ESPKPWPLHL
VGSRSGAGIH
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