Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3609 |
Symbol | |
ID | 4031542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 3969897 |
End bp | 3971819 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637972020 |
Product | AsmA |
Protein accession | YP_578797 |
Protein GI | 92119068 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGCAT TGAAAATCGC AGGCGTTGCC GCGACCTGCC TGATCGCGAT CGCGATCGTG CTCCTCGTGA CCGGAATCCC GTCCGGTTTC GTCACCTCGC TCGTGCAGGA CCGGATCGAA CGCGAGACCG GTTACCGGAT CGCGATCAAC GGCAAGACAG GAATCGGGTT GTGGCCGTCG TTTAGCCTCG CGCTGCACAA CGTCACGCTG GAAAATCCGA AGACTACCGC AACCGATGTA CACATTGCGG TCGGAGAAGT TCGCGCCGCG CTTCCATTTG CCAGCCTGCT GTCGGGAGCC CCGAAAGTTT CGGACCTGAC CATTGATCAT GCCACGCTGC GGCTGCCGCT GCTGCGCGAG CGCACCCGCA TCGACATTCC GCCCGGGCCG GACCACTCTG GAGATACGTC GGAAGACGAC ACGCCATTCC CTATCGACCG GGTGACGATC TCCAACGGCA CGATCGTTTT CTTCGATCCG CAAACCAGCT CGGAAGGCCG CGTCGGCGAC GTTAACGCGA GCGTGACGCT CAGTACCGAC CGGCAAATCA ACGTCACCGG CAATGCGCGC CCCGGTAATC ATTCGCTGAA GTTCGGGATC AAGGCGACAC CGCCCGCGGG GCCGCTTGGA CGACAGAACA TCCCGACGGA ACTGACGCTC GACGTTCCCG GCCTGCCGAC GCGCGAGTTG ACCGCCAAAG CCGAGGTCCG GATCAACGGG CGAATGCTTC TCATCAATGG CCTGTCGGGA TCGCTCAACG ACGGCAAGTT CAACGGCTGG GCATCGGTCG ATTTGGCGAG CAAGCCGCTG GTGAAGCTCG ATCTCGATTT TCAGCGGCTC GGCTTAGGCG CGGCGCCGCG TCAGCCTCCT GCACCGCGAT CTGGCGCGCA GCCATGGAGC GATGCGCCGA TCGATGTTGG TGCGTTGAAC TACGTCGACG CGCAGGTGAG GGTTTCGGCG GCCGAACTGA ATATCGGGGA CGCGCGCTTT GCGCCGGCCG CGGTCGACGC CACCATCGCC AGCGGCGTTA TGAAAGCTTC ATTTTCGAAC CTTGGCGCAT ATGACGGGCA AGCCAATGGC GCCCTGACGA TCGATGCGTC CACGAACAAT CCGTCCTACG CGCTCCGGGC CGGCGTGACC GGCGTTCGCG CGCTGCCGCT GCTGTCGAGC CTTGCGGATT TCGACAATGT CGATGGCAGG ATGCGGGCGA TGGCCGACGT GCGGGGCACC GGCGCCAGCT TGCGCGCGAT CCTATCGAAC CTGACCGGGA CGGCTTCGAT CGACGTCCGC GACGGCGCGA TCCGCAATCT CAACCTTGCG AAAATGATCC GCGCGTTGAC GTCGGGCACC CTGTCAGGAT GGCAGACGCG CCCGGACCAG ACCACCGACA TGTCGCAACT CAGCGCGACC GCAACCATCG CCCAGGGACA GGCCACCACC AACGACCTGT TTCTGGCCGG GCCGCTGGTG CGGATGACCG GCGCCGGTAC TGTCGATCTC GGCTCGAAGA CGCTGGATTT CCGGGTCGAG CCGAAACTCG TCATGACCGC GGAGGGTCAA GGGGGGCGCG CCGACCCGGT CGGCCTCGGC ATTCCGGTCG TCGTGCAGGG GACGTGGAGC GAGCCGCGCA TCTATCCGGA TGTGGCCGGC ATTCTGGATG ATCCCGCAGC CGCCTATGCG AAGCTTCGGG AATTGGGGCA GGGACTGTTC GGCCAAAGCG GACTTGGAAG GTCCGACAAA TCCGGCCCCA GTCTCGGAGA GACTCTTGAT AGCATGATCC GGCAGGGTCT CGGCGCCGGC GCGGGCACGG GTGAACCGCC CGCTTCCGGC CGGCCATCCC AGGGAACGCC GTCCCAAGAC AAACCGTCCC AAGACAAACC CCCGCCCATC GACGACATCA TGAAGCAGCT GTTCGGCCGC TAG
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Protein sequence | MGALKIAGVA ATCLIAIAIV LLVTGIPSGF VTSLVQDRIE RETGYRIAIN GKTGIGLWPS FSLALHNVTL ENPKTTATDV HIAVGEVRAA LPFASLLSGA PKVSDLTIDH ATLRLPLLRE RTRIDIPPGP DHSGDTSEDD TPFPIDRVTI SNGTIVFFDP QTSSEGRVGD VNASVTLSTD RQINVTGNAR PGNHSLKFGI KATPPAGPLG RQNIPTELTL DVPGLPTREL TAKAEVRING RMLLINGLSG SLNDGKFNGW ASVDLASKPL VKLDLDFQRL GLGAAPRQPP APRSGAQPWS DAPIDVGALN YVDAQVRVSA AELNIGDARF APAAVDATIA SGVMKASFSN LGAYDGQANG ALTIDASTNN PSYALRAGVT GVRALPLLSS LADFDNVDGR MRAMADVRGT GASLRAILSN LTGTASIDVR DGAIRNLNLA KMIRALTSGT LSGWQTRPDQ TTDMSQLSAT ATIAQGQATT NDLFLAGPLV RMTGAGTVDL GSKTLDFRVE PKLVMTAEGQ GGRADPVGLG IPVVVQGTWS EPRIYPDVAG ILDDPAAAYA KLRELGQGLF GQSGLGRSDK SGPSLGETLD SMIRQGLGAG AGTGEPPASG RPSQGTPSQD KPSQDKPPPI DDIMKQLFGR
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