Gene Nham_3598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3598 
Symbol 
ID4031531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3951704 
End bp3952489 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content60% 
IMG OID637972009 
Productoxidoreductase, molybdopterin binding 
Protein accessionYP_578786 
Protein GI92119057 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCGTC TCCGTTCACT TCTGATCCCG GGCGTCGACA AGAAGCTGCT GGTCAGGGAC 
GCTGTGAAAT TGCTGCCCGA TCCGGCGCGC CGCCGTTTCA TCGCCGGCGG CGCCAGCCTC
GGCGCATTGA CGTTGCTGAC GGGATGCGAC GTGTCCGACA GTGTCTCGGC GGAAAAGCTT
CTGGTGCGGA TTTCGAAGTT CAACGACAAG GTGCAGGCCG CGATCTTCAA TCCGAACACG
CTGGCGCCGA CCTATACGGA GGCCGACATC ACGCGGCCGT TTCCATTCAA CGGCTACTAT
GCCGAGGCGG AGGCGCCCGA TCTCGACGGC GAGGACTACG AATTCGAGGT GCGGGGTCTC
GTCGACAACA AGAAATCATG GACGCTGGAC GAACTTTACA GGCTGCCCGA GGTCACCCAG
ATCACGCGGC ATGTCTGCGT CGAGGGCTGG AGCGCGATCG GAAGCTGGAG CGGGACGCCG
CTGCGCGATT TCCTCAAATT GATCGGCGCC GACACAAGGG CGAAGTATTG TTGGTTCCAG
TGCGCCGATG TCGACGGCTA CAACAGCCCG CTCGACATGG CGACCGCCCT GCATCCGCAG
ACCCAGATGA CATTCAAGTT CGACGGAAAA ATCCTGCCGC GCAAATACGG TTATCCGATG
AAGATCAGGG TCCCGACCAA GCTCGGTTTC AAGAATCCGA AATACGTGAT CTCGATGGAA
GTCACCAACG ACTACAAGGG CGGCTACTGG GAAGACCAGG GTTACAATTC CTTCAGCGGC
CTCTGA
 
Protein sequence
MRRLRSLLIP GVDKKLLVRD AVKLLPDPAR RRFIAGGASL GALTLLTGCD VSDSVSAEKL 
LVRISKFNDK VQAAIFNPNT LAPTYTEADI TRPFPFNGYY AEAEAPDLDG EDYEFEVRGL
VDNKKSWTLD ELYRLPEVTQ ITRHVCVEGW SAIGSWSGTP LRDFLKLIGA DTRAKYCWFQ
CADVDGYNSP LDMATALHPQ TQMTFKFDGK ILPRKYGYPM KIRVPTKLGF KNPKYVISME
VTNDYKGGYW EDQGYNSFSG L