Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3523 |
Symbol | ruvC |
ID | 4030793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 3875377 |
End bp | 3875913 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637971935 |
Product | Holliday junction resolvase |
Protein accession | YP_578712 |
Protein GI | 92118983 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0817] Holliday junction resolvasome, endonuclease subunit |
TIGRFAM ID | [TIGR00228] crossover junction endodeoxyribonuclease RuvC |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCGGTTG CGCTAACATG GGCTATGACC TCCTCACCGA TTCGTATTCT GGGCATCGAC CCCGGCCTGC GCCGCACCGG CTGGGGCGTG CTCGACATCG AGGGCAACCG GCTGATGTTC GTCGGCTGCG GCTCGGTGGA AACGCGCGAG CAAATGGCGC TGGCGAGCCG GCTGCTGGCG ATCCATGAAG GACTCGGCCG GGTACTCGAC GAGTTCCGCC CGGCGGAGGC GGCGATCGAG CAGACCTTCG TCAACAAGGA CGGCGTGGCG ACGCTGAAGC TCGGGCAGGC GCGCGGCGTC GCGATGCTGG CGCCGGCGAT GTTCGGCATC GTGGTGGCGG AATACGCGCC CAATCAGGTG AAAAAAACCG TGGTCGGCGC GGGTCACGCC GACAAGACCC AGATCCAGGC GATGCTGAAA ATCCTGCTGC CGAAAGCCGA TCCGAAGAGC GCCGACGCCG CCGATGCGCT CGCCATCGCC ATCACCCACG CGCATCACCG GGGCGCTGCG GCGCTGCGGA TGAAGGTGGC TGGATGA
|
Protein sequence | MAVALTWAMT SSPIRILGID PGLRRTGWGV LDIEGNRLMF VGCGSVETRE QMALASRLLA IHEGLGRVLD EFRPAEAAIE QTFVNKDGVA TLKLGQARGV AMLAPAMFGI VVAEYAPNQV KKTVVGAGHA DKTQIQAMLK ILLPKADPKS ADAADALAIA ITHAHHRGAA ALRMKVAG
|
| |