Gene Nham_3523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3523 
SymbolruvC 
ID4030793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3875377 
End bp3875913 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content67% 
IMG OID637971935 
ProductHolliday junction resolvase 
Protein accessionYP_578712 
Protein GI92118983 
COG category[L] Replication, recombination and repair 
COG ID[COG0817] Holliday junction resolvasome, endonuclease subunit 
TIGRFAM ID[TIGR00228] crossover junction endodeoxyribonuclease RuvC 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGTTG CGCTAACATG GGCTATGACC TCCTCACCGA TTCGTATTCT GGGCATCGAC 
CCCGGCCTGC GCCGCACCGG CTGGGGCGTG CTCGACATCG AGGGCAACCG GCTGATGTTC
GTCGGCTGCG GCTCGGTGGA AACGCGCGAG CAAATGGCGC TGGCGAGCCG GCTGCTGGCG
ATCCATGAAG GACTCGGCCG GGTACTCGAC GAGTTCCGCC CGGCGGAGGC GGCGATCGAG
CAGACCTTCG TCAACAAGGA CGGCGTGGCG ACGCTGAAGC TCGGGCAGGC GCGCGGCGTC
GCGATGCTGG CGCCGGCGAT GTTCGGCATC GTGGTGGCGG AATACGCGCC CAATCAGGTG
AAAAAAACCG TGGTCGGCGC GGGTCACGCC GACAAGACCC AGATCCAGGC GATGCTGAAA
ATCCTGCTGC CGAAAGCCGA TCCGAAGAGC GCCGACGCCG CCGATGCGCT CGCCATCGCC
ATCACCCACG CGCATCACCG GGGCGCTGCG GCGCTGCGGA TGAAGGTGGC TGGATGA
 
Protein sequence
MAVALTWAMT SSPIRILGID PGLRRTGWGV LDIEGNRLMF VGCGSVETRE QMALASRLLA 
IHEGLGRVLD EFRPAEAAIE QTFVNKDGVA TLKLGQARGV AMLAPAMFGI VVAEYAPNQV
KKTVVGAGHA DKTQIQAMLK ILLPKADPKS ADAADALAIA ITHAHHRGAA ALRMKVAG