Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3411 |
Symbol | |
ID | 4033234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 3754731 |
End bp | 3756308 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637971822 |
Product | FGGY-family pentulose kinase |
Protein accession | YP_578601 |
Protein GI | 92118872 |
COG category | [C] Energy production and conversion |
COG ID | [COG1069] Ribulose kinase |
TIGRFAM ID | [TIGR01315] FGGY-family pentulose kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.110951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGACC TCGTGATCGC AGTGGATGTC GGATCGAGCA GCGCACGCGC CGGCGTGTTC GACAAGCGCG GTGTTCTGCT TGCGCGCGCC GAAGCTCCGT TCGCGACCGC ACACCCTGAA CCCGGTCATG CCGAACACAG CTCGGATGAA ATCTGGACGG CGGTCTGCCA GGCTGTGCGC GGAGCCATTA CGGCCGGACA CATCGCTGCC GAAGCGGTCA AGGGCATCGC CTTCGACGCC ACCTGCTCGC TCGTCACCCT TGACCGCGCC GGCCGGCCGG TCACAGCCTC TCTGACCGGC GAGGATCGCT GGAACGTGAT CATGTGGGCC GATCATCGGG CCACCGCGGA AGCCGACGAG ATCACCGCCA CCCGCCATCG CGTGCTCGAT CACGTCGGCA ATGTGATGTC GCCGGAAATG GAAATCCCGA AGCTGCTCTG GCTGAAGCGG CATTGCCCCG ATGCCTGGCA CCGCTACGGG CTTATGCTCG ACCTCACCGA CTTCCTGACC TGGAAGGCGA CCGGCCGCGC CGCGGTCTCC ACCTGCACGG TAACATGCAA ATGGACCTAT CTCGCCCACG AGAAGCCGGG TTGGCAAAGC GATTTCCTGT CGCGCGTCGG GCTCGATGAT TTGCAGGATC GGGCATCGCT TCCCGCCTCG ACATTGCCGA TCGGAACAAG CGCCGGCCCG CTGACTGCCG AAAGCGCCGG CCAGCTTGGC CTGCCGCGCG ACTGCGTTGT CGGCGTCGGC GCGATCGATG CCCATGCCGG CGGCATCGGC GTGCTCGGCG GGCTCGACGC AACCGGCCTC AACGAGACTC TCGCCATGAT CGCCGGCACC TCCTCGTGTC ACATGGCGGC CTCGCCCGAC CCCAGGCAAA TTCCCGGCCT ATGGGGCCCC TATTACGACG CGATGCTACC TGGCCACTGG CTGAACGAAG GCGGTCAATC GGCCACCGGC TCGTTGCTCG ATCACATTCT CGACCTCCAC GCCGAGGGAC AATCGCTTGG CGCGGATCGG CACGCGGTGA TCGCGGCGCG GATCGAGGCC GCGCTCGCCG CCGACGGATT CGCATTCGTC GACGACCTGC ATGTGCTGCC GGACTTTCAC GGAAACCGCT CCCCGCTCGC CGATCCCGAT TCGGTCGGCG TGATCCACGG GCTGCGTCTC GATGCCTCGG CCCATTCGCT GACCCGGCTT TATTTCGCGA CCGCTGTGGG CATCGCGCTG GGAACGCGGC ACATCATCGA TGCGCTGAAC GACGCCGGCT ACGCCATCGC GCATATCCGC TTGACCGGAG GCCATGCTGC GAGCCAGCTG CTGGTCCAGC TCTACGCCGA CGCCACCGAT GTCGCGGTAT CGCTGCCCGA ACAACCCGAC GGGGTGCTGC TGGGAACCGC ATGTGTCGCC GCCGCCGGCT GTGGGCTTTA TCCGTCGGTC ACGGCGGCGG CTGCGGCGAT GACCCGGATC GGCCGAACCG TGCAGCCAGC CGCTGCGGCG CGCGATTTTT TCGACCGGCG TTACCGCGCG TTTCTATTGA TGCACGAGCA TCGCCGGGCG GTATCGCGGC TCGCTTGA
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Protein sequence | MPDLVIAVDV GSSSARAGVF DKRGVLLARA EAPFATAHPE PGHAEHSSDE IWTAVCQAVR GAITAGHIAA EAVKGIAFDA TCSLVTLDRA GRPVTASLTG EDRWNVIMWA DHRATAEADE ITATRHRVLD HVGNVMSPEM EIPKLLWLKR HCPDAWHRYG LMLDLTDFLT WKATGRAAVS TCTVTCKWTY LAHEKPGWQS DFLSRVGLDD LQDRASLPAS TLPIGTSAGP LTAESAGQLG LPRDCVVGVG AIDAHAGGIG VLGGLDATGL NETLAMIAGT SSCHMAASPD PRQIPGLWGP YYDAMLPGHW LNEGGQSATG SLLDHILDLH AEGQSLGADR HAVIAARIEA ALAADGFAFV DDLHVLPDFH GNRSPLADPD SVGVIHGLRL DASAHSLTRL YFATAVGIAL GTRHIIDALN DAGYAIAHIR LTGGHAASQL LVQLYADATD VAVSLPEQPD GVLLGTACVA AAGCGLYPSV TAAAAAMTRI GRTVQPAAAA RDFFDRRYRA FLLMHEHRRA VSRLA
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