| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3108 |
|---|
| Symbol | |
|---|
| ID | 4029897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 3428954 |
|---|
| End bp | 3429934 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637971523 |
|---|
| Product | transketolase, central region |
|---|
| Protein accession | YP_578305 |
|---|
| Protein GI | 92118576 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCAAG TGACGCTGAT CGAAGCCGTC AACATGGCGC TGGCGCGCGC GATGGCCGAC
GATGCCGGGG TGGTGGTGCT CGGCGAGGAT GTCGGCGTCA ACGGCGGCGT ATTCCGCGCT
ACTGTCGGTT TGCAGCAACG TTTTGGACCC GAGCGTGTGC TGGACACACC TCTGGCCGAA
CTTCTGATCA GCGGGCTGTG TGTCGGCCTG GCGAGCCAGG GCCTTAAACC GGTCGGCGAG
ATCCAGTTCA TGGGCTTCAT CTATCCCTGT GTCGATCAAC TGGTGAACCA TGCTTCGCGG
TTGCGTAACC GCACTCAGGG GCGGCTCAGT TGCCCGATGG TCTTGCGCGT GCCGCATGGC
GGCGGCATCC GCGCGCCCGA GCATCATTCC GAAAGCACCG AGGCGATGCT CGCGCATATT
CCCGGTCTGC GCGTGGTGAT CCCGTCGTCT CCCGAACATG CCTACGGGTT GTTGCTGGCC
GCGATCCGCG ATCCAGACCC CGTGGTTTTC CTGGAGCCGA CCCGCATCTA TCGCGCGGCC
AAGGGCGAGG TCGATGACGA CGGCGTGGCA CTGCCGCTGG ATGCCGCGTT CGTGCTGCGG
GAGGGTCGCG ATGTCACCCT GATAAGCTGG GGCGCGATGG TGCGCGAGAC GTTGGCAGCG
GCCGACGCAC TGGATACCGA AGGCATCAGC GCCGAGGTGA TCGACCTCGC GACGCTGAAA
CCATTCGACG AAGACACCGT GCTCGCGTCG GTGGCGCACA CCGGACGCTG CGTGATCGTG
CATGAAGCCG CGCGCACCGG CGGCTTCGGC GGCGAGATCG CCGCGCTGAT CGCCGAGCGC
GGGTTGACGT CGCTGCTGGC GCCGATTGCG CGCGTCACCG GCTACGATAC GGTGATGCCG
CTCCCGCGGC TCGAACAGCA TTACATTCCG TCGGTCGGCC GCATCGTTGC TGCCGGTCGG
GCGGCGTGCC GGTTCAATTG A
|
|---|
| Protein sequence | MPQVTLIEAV NMALARAMAD DAGVVVLGED VGVNGGVFRA TVGLQQRFGP ERVLDTPLAE
LLISGLCVGL ASQGLKPVGE IQFMGFIYPC VDQLVNHASR LRNRTQGRLS CPMVLRVPHG
GGIRAPEHHS ESTEAMLAHI PGLRVVIPSS PEHAYGLLLA AIRDPDPVVF LEPTRIYRAA
KGEVDDDGVA LPLDAAFVLR EGRDVTLISW GAMVRETLAA ADALDTEGIS AEVIDLATLK
PFDEDTVLAS VAHTGRCVIV HEAARTGGFG GEIAALIAER GLTSLLAPIA RVTGYDTVMP
LPRLEQHYIP SVGRIVAAGR AACRFN
|
|---|
| |