Gene Nham_2991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2991 
Symbol 
ID4033256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3293745 
End bp3296429 
Gene Length2685 bp 
Protein Length894 aa 
Translation table11 
GC content64% 
IMG OID637971426 
Productosmosensitive K+ channel signal transduction histidine kinase 
Protein accessionYP_578208 
Protein GI92118479 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGGCG AGCCGGCCAC ACGAGCCTCA CCCGACGCGC TGCTGGCCCT CGCCAAAAAG 
GAGGGACGCG GCCATCTGAA GATTTTTCTC GGCGCCGCGC CGGGCGTCGG CAAGACCTAC
GCGATGCTGG CGGCGGCACG CAGCGAGATT GCCGGTGGTC GCAACGTTGT CGTGGGGCTC
GTGGAAACCC ACGGCCGCCG CGAGACCGAC CAGATGCTCG ACGGCTTTGA GGTGCTCGCG
CGCAAACCGA TCGTCTATCG CAATCAGGTG ATGCACGAGT TCGACCTCGA TGCCGCGCGG
GCGCGCAAAC CGGGCCTGCT GCTGGTCGAC GAATACGCTC ACACCAACGT GCCGGGCAGC
CGGCACCCCA AGCGCTGGCA GGACATCGAT GAACTGTTGC GGGCAGGGAT CGACGTCTGG
ACCACGCTGA ACATTCAGCA TCTCGAAAGC CTCAACGACG TCGTCCAGAA AATCAGCAAG
GTGCGCGTGC GCGAGACCGT GCCCGATAAG GTCTTCGATC AAGCGGACGA GGTCGTGCTG
GTCGACTTTC CGCCGGACGA ATTGCTGAAG CGCCTCGCGG AAGGCAAGGT CTACGTTCAG
GATACCGCCG CGCGCGCCGT CGAGAATTTC TTCAAGCCGC AAAACCTGAC GGCGCTGCGC
GAACTCGCCA TGCGCCGCGC GGCCGAGCGG GTGGATGCAT CCCTGATCGA GCGGATGCAG
GCGCAGGCGA TCGATGGGCC TTGGGCGGCC GGCGAACGTA TTCTGGCATG TATCGGTCCC
GATCCGGTGT CGCCCACCGT GGTTCGTACC GCCAAGCGGC TCGCAGACCT GATGGATGCG
CCGTGGATCG CGGTGACGGT CGAGCGGCCC GGTGCCAGCC TCAATAGTGC GGCCCGTCAA
CGTCTCGATG AGGTGATGAA GCTGGCGGAA AGTCTGGGCG CGGAGACGCA AACCCTGACT
GGTGCCGATC TCCCTGCCGA GTTACTGCGC TTTGCGAAAT TCGAGAACGT CACCCAGATC
GTGGTCGGCC GCTCGCGCGG TGGATTTTTC AGCGAACTGC TGCGCCGGTC GCTGCCGTAC
GAACTGGTCC GGCGAACACA GGACATCGCC ATTCATCTGG TCACGCGCGA AAGCGATGTG
TCCGAACCGG CGTCGGGCTG GTTGCTGCAC AACAGGAGTC CGCTGCGTCC ACTTCCGTTC
GTCTACGCCA CCCTGACGGT GGCTGCGGCG CTCGCCGTCA GCAAAGTATT GACCGAACTG
ATGCCGATCC CGAATCTGTC GATGGTGTTC ATGCTATCGG TGCTGGTGAG CGCCATCAAC
TTCGGCGTCT GGCCCGCGAT CTACGCCTCG GTGCTGTCAT TCTTCATCTA CAACTTCTTC
TTCATTCCGC CGCTCTACAA CTTCACGATT GCCGAGCCCT ATGAACTGCT GGCGCTGGTC
ATCTTCCTGG TCGTCGCGAT TGTTACCTCC GCGATGGCAG GTCGGGTGCG GGATCAGGCG
CGCGTATCCG CGGGCCGGGT TCGCGCCATG CGCCGACTCT ACGAATTCAC ACGCCGCCTG
TCGGGATTGG CGACACGGGA CGGCATTGCT GAAGGCGCGG CCGGGGAAAT TCATGCCAGC
CTGGCGCGGC CGGTCGTGGT GCTGCTGGCG GAGGGCGATG GTCTTGCCCT GACCGCAGCC
TGGCCGCCGG AAGATGCGCT GGATACGGCG ACCATGACGG CCGCGCGTTG GGCCTACAAC
CATGCGGAAC CCGCGGGCGC CGACACCGGG ACCTTGCCGA TCATCCCGTG GTATTTCGTT
CCGCTGCGAA TCGGCGACAA AGCCCTCGGC GTCATCGGCG TTGCAAAGGA CAAGGATACG
CCGCCCCTCG ATTCGGAGGC GCGTACCTTG CTCGACACGT TATCCGAGCA AACCGCCGCG
GCGCTTGAAA GGGCCGCATT GGCAAGCGAG ATGGTGAGCG CCAGGACAGC GACCGAAACC
GAGCGCGTTC GCAATACGCT GCTGGCCTCG GTTTCGCATG ATTTCCGGAC GCCGCTGTCC
TCCATTCTTG GCGCCGCAAC CAGCTTGCTG AGCTACGGCG ACAAGATCGG TGCCGCAGCC
AAGACCGATC TGCTCGGGCA GATCAAGCAG GAGACCGAAG GGCTTGATGA GATGGTTCGT
AACCTGCTTG CGATCACGCG CATCGATTCC GGGGCGCTCG AACTGCGCCG TGACTGGATC
GACCTGCGCG AGATCGTCGA ACGCGTGGCC AGCGCCGCGC GGCGGCGCAG CGCACCGCAA
CGTATCGATA TTACGATGCC GCCCGATCTT CCGCTGGTTC GTGCCGATGC GGCGCTGGCG
GAGCAGGCGA TCGGCAATGT CGTGGCCAAT GCAATTGTGC ATACGTCGAA GGAGACGCAC
ATCGTGATCG ATGCGCAGTC CGGATTGTCA GACATAACCG TACGCGTGAC CGACAACGGG
CCCGGAATCG GGTCCGATAT ACTGCCGCAC GTCTTCAACC GGTTCGTCAG GGGAAACGGT
GCGGACGACG TGCATGACGG CGGGGAGGGA ACGGGCCTCG GTCTTGCGAT CGCAAGGGGA
ATTATGGAGG CTCATGGCGG ATCGATTACC GTCGACAGCC CCGTGGAGGG GCAGCCCGGT
GCCCGGTTCG TGATGGTCTT TCCGCGAGAG GACGGCGCAA CGTGA
 
Protein sequence
MSGEPATRAS PDALLALAKK EGRGHLKIFL GAAPGVGKTY AMLAAARSEI AGGRNVVVGL 
VETHGRRETD QMLDGFEVLA RKPIVYRNQV MHEFDLDAAR ARKPGLLLVD EYAHTNVPGS
RHPKRWQDID ELLRAGIDVW TTLNIQHLES LNDVVQKISK VRVRETVPDK VFDQADEVVL
VDFPPDELLK RLAEGKVYVQ DTAARAVENF FKPQNLTALR ELAMRRAAER VDASLIERMQ
AQAIDGPWAA GERILACIGP DPVSPTVVRT AKRLADLMDA PWIAVTVERP GASLNSAARQ
RLDEVMKLAE SLGAETQTLT GADLPAELLR FAKFENVTQI VVGRSRGGFF SELLRRSLPY
ELVRRTQDIA IHLVTRESDV SEPASGWLLH NRSPLRPLPF VYATLTVAAA LAVSKVLTEL
MPIPNLSMVF MLSVLVSAIN FGVWPAIYAS VLSFFIYNFF FIPPLYNFTI AEPYELLALV
IFLVVAIVTS AMAGRVRDQA RVSAGRVRAM RRLYEFTRRL SGLATRDGIA EGAAGEIHAS
LARPVVVLLA EGDGLALTAA WPPEDALDTA TMTAARWAYN HAEPAGADTG TLPIIPWYFV
PLRIGDKALG VIGVAKDKDT PPLDSEARTL LDTLSEQTAA ALERAALASE MVSARTATET
ERVRNTLLAS VSHDFRTPLS SILGAATSLL SYGDKIGAAA KTDLLGQIKQ ETEGLDEMVR
NLLAITRIDS GALELRRDWI DLREIVERVA SAARRRSAPQ RIDITMPPDL PLVRADAALA
EQAIGNVVAN AIVHTSKETH IVIDAQSGLS DITVRVTDNG PGIGSDILPH VFNRFVRGNG
ADDVHDGGEG TGLGLAIARG IMEAHGGSIT VDSPVEGQPG ARFVMVFPRE DGAT