Gene Nham_2989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2989 
Symbol 
ID4033254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp3292321 
End bp3292917 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content59% 
IMG OID637971424 
Productplasmid pRiA4b ORF-3-like 
Protein accessionYP_578206 
Protein GI92118477 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.176424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCG ACACCATCGC CCGCCTCAAG ATTACCCTTG ACGATGTCGA GCCCCTGGTT 
CTGCGTCGTA TCGAGGTCCC ATTCAACATT CGACTGGACC GCCTGCATGA GGTGCTGCAG 
GCAGCCATGG GATGGACCAA TAGCCATCTC TACGAAATCC GCGCTGGCGG CGCCGGCTGG 
GGCCTCACCG ATCCTGATTG GCCTGACGGA CCGCTCGATG CACGAAAGGC AAGGCTCGAC 
GACATTGTCG AAGACACCGG CGCAAAGACG CTACGCTATC TCTATGACTT CGGTGACGGT 
TGGGAGCACA TCATAAAGAT CGAACGTCTC GTCGATCCTG TACCCGGCGA GCGCTATCCA 
CGCTTGCTGG AGGCCAGCGG GCGATGCCCT CCCGAAGATG TTGGCGGACC GCCTGGCTAT 
GCCGAAACCC TCGAAGCCAT CAACGATCCG CGGCACGAGC GCCATGACGA ATGCAAGGAA 
TGGATGCCAG AAAACTTCGA TCCAGTCATC GTCAACGTCG AAGCGATCGC CGATGAGCTC 
GCCGCACTTG CCAAACACTG GTCTCGGAAA CCTGCTAGGC AATCCAAATC AAACTAA
 
Protein sequence
MTADTIARLK ITLDDVEPLV LRRIEVPFNI RLDRLHEVLQ AAMGWTNSHL YEIRAGGAGW 
GLTDPDWPDG PLDARKARLD DIVEDTGAKT LRYLYDFGDG WEHIIKIERL VDPVPGERYP 
RLLEASGRCP PEDVGGPPGY AETLEAINDP RHERHDECKE WMPENFDPVI VNVEAIADEL 
AALAKHWSRK PARQSKSN