| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2974 |
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| Symbol | |
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| ID | 4033124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3271717 |
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| End bp | 3274161 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637971412 |
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| Product | Outer membrane autotransporter barrel |
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| Protein accession | YP_578194 |
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| Protein GI | 92118465 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACCT CGTCTGACAC CGCTATCGAT GGCTGGACGT TCAATGCCGG GGCGTCGAAC
TACCTTATTT CGAACAGTCA CCGGTTCGAT TTCAATGGCG CCGGAATCGT CGTCAATGGC
GGTTCCGTCA TTCTCAAAAA TACTGGCACA GTCTTTTTTC TTAGTGGCAC GGCGGGCAGC
GCCACGATTG ATAACGACAG CGGAGGCGTA TTTGGTGCGG GCATCTTGAC CTTCAATGAT
AGCACGGCCG GCAGCGCCAC GATTACTAGC CACGACGGAG GCGGCACGAT ATTCCTTGGC
GCCAGCACGG CCGGCAGCGC CACGATTATT AACAACTACG CTGGCGGCAC GCTTTTCGGT
GGGACCGCTA CGGCCGGCAG CGCGACGATT ATCAACAACA GCGGAGGCAG CACGGGTTTC
GCGCAAACCA GCACCGCCGG CAACGCCACG ATCATCAACA ACGCCGGTGG GACTGTTTCC
TTCCGGGACT CCGGCACCGG CGGTACGGCA CGATTGATCA ACGATGGCGT GGTTGACCTG
ACCTATCTTT TCGATGCCCA AGGCATCACT CTGGGCTCGA TAGAGGGAAG CGGTGTTTTT
CAGCTGGCCA CAAAAAATCT GGCGGTCGGG GGCAACAACC GGTCAACAAC GTTCTCAGGG
GCGATTCTGG ATCAGGGTTC ATTCCCCAAC CCCTTAGCCG TCGGAGCCTC CCTGACCAAG
GAGGGCACCG GCACGCTGAC GTTGACGGGC ACCGCCAACG CCTATACCGG CGCGACCACC
GTCAACGGCG GCACGCTGGT GGTGAACGGC TCGATCGAGA CCTCGAGTCT CGTCACGGTA
AACTCCGGCG GCACGTTGGC GGGTACCGGC ACCGTCGGTA ACACCGCGAT AGCAGGCGGC
ATTTTCGCGC CCGGCTCCGG TACGCCGGGA TCGTCGATGA CTGTCAACGG CACGCTCGGC
CTTTCGCCGA CATCGACCTA TGCCGTCAAC ATCGGCCCCA TGACGTCGTC CTTTGCCAAT
GTCACGGGCG CCGCAACGCT CGGCGGCGCC ACCGTCAACG CGAGCTATGC TGGTGGAAGC
AATGTCAGCA AACATTACAC CATCCTGACC GCAACTGGTG GGATCAGCGG CACCTTCGGC
GTGGTCAATA GCAATCTGCC GGCCAATTTC ACGACCGCGC TTAGCTATGA CAGCAACAAC
GCCTATCTCG ACCTGTCATT TGGCTTTGCG CCGCCACCCG GGGGCTTCAG TACCAACCAG
AATAACGTCG CCAACGCGGT GATGAACGCC TTCAACACCA ACGGCATTCC GCTGGCGTTC
GGCGCGCTGT CGCCGCAGGG GCTGACGCAA GTGTCCGGCG AAGCCGCCAC CGGCACCCAG
CAGGCGACGT TTGACGCCAT GAGCCTGTTC ATGGGCGTGA TGACCGACCC GTTCATGGCG
GGACGCGGTG ACGGCATCCC CTCATCGAAT GGCGCGCCAG CATTCGCGGC TGAGGACCAC
GATGCGCTGG GTTACGCTGC GCGCGGCAAT GGCCGCAATG CCGCCGAGCG CAATGCCTAT
GCCGCGATGT CGCGCAAGGC ATTGCCGATG GCGCCAAGCT TCGAACAGCG CTGGAGCGTG
TGGGCGGCGA GCTATGGCGG CTCGCAGACC ACGTCAGGCA ACAGCGTCGT CGGCTCCAAC
ACCGCGACCA GCAACCTGTA CGGTGTCGCG GTCGGCGCTG ACTACCGCGT CTCGCCGGAT
ACACTGGTCG GGTTTGCGAT GGCCGGCGGC GCCACCAACT TTAACGTTGC AGGTGGACTG
GGCTCCGGCC GCAGCGATCT GTTTCAGGCC GGTGCGTTCG TCCACCACCA TATCGGCGCG
GCGTACCTCA GCGGCGCGCT GGCCTATGGC TGGCAGGACG TCACCACCGA CCGCACCGTG
AGCGCGGGCG GCATCGAGCG GCTGCGCGCC AACTTCAACG CGAATGCCTT CTCGGGGCGA
CTCGAAGGTG GTTACCGTAT CGCCACGCCG TTGATGGGCA TCACGCCCTA TGCCGCCGGG
CAATTCACCA CCTATGATTT GCCGACCTAT GCCGAACAGG CCAGCACCGG AGGTCTGTTC
GCGCTGAACT ACGCCGCGAA GAATGTCACC GCGTCACGCA GCGAACTCGG CATCCGTACC
GACAAATCCT TCGCGCTTAG CAATGCCATC CTGACGTTGC GCAGCCGTGC CGCGTGGGCG
CATAACTTCG ACACCGACCG TGCGATCGCC GCGACCTTCC AGTCGCTGCC CGGCGCATCC
TTCGTCGTCA ACGGCGCGGC ACAAGCCCGC GAGGCCGCGC TGCTTACCGG CTCCGCCGAA
ATGAAATGGG CCAACGGCTT CGCGCTCGCC ACCACCTTCG AGGGCGAGTT CTCCGACACC
ACTTCCAGCT ACGCCGGCAA AGGCGTCGTG CGGTATAGCT GGTGA
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| Protein sequence | MSTSSDTAID GWTFNAGASN YLISNSHRFD FNGAGIVVNG GSVILKNTGT VFFLSGTAGS
ATIDNDSGGV FGAGILTFND STAGSATITS HDGGGTIFLG ASTAGSATII NNYAGGTLFG
GTATAGSATI INNSGGSTGF AQTSTAGNAT IINNAGGTVS FRDSGTGGTA RLINDGVVDL
TYLFDAQGIT LGSIEGSGVF QLATKNLAVG GNNRSTTFSG AILDQGSFPN PLAVGASLTK
EGTGTLTLTG TANAYTGATT VNGGTLVVNG SIETSSLVTV NSGGTLAGTG TVGNTAIAGG
IFAPGSGTPG SSMTVNGTLG LSPTSTYAVN IGPMTSSFAN VTGAATLGGA TVNASYAGGS
NVSKHYTILT ATGGISGTFG VVNSNLPANF TTALSYDSNN AYLDLSFGFA PPPGGFSTNQ
NNVANAVMNA FNTNGIPLAF GALSPQGLTQ VSGEAATGTQ QATFDAMSLF MGVMTDPFMA
GRGDGIPSSN GAPAFAAEDH DALGYAARGN GRNAAERNAY AAMSRKALPM APSFEQRWSV
WAASYGGSQT TSGNSVVGSN TATSNLYGVA VGADYRVSPD TLVGFAMAGG ATNFNVAGGL
GSGRSDLFQA GAFVHHHIGA AYLSGALAYG WQDVTTDRTV SAGGIERLRA NFNANAFSGR
LEGGYRIATP LMGITPYAAG QFTTYDLPTY AEQASTGGLF ALNYAAKNVT ASRSELGIRT
DKSFALSNAI LTLRSRAAWA HNFDTDRAIA ATFQSLPGAS FVVNGAAQAR EAALLTGSAE
MKWANGFALA TTFEGEFSDT TSSYAGKGVV RYSW
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