Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2963 |
Symbol | |
ID | 4033114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 3258336 |
End bp | 3259145 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637971405 |
Product | uroporphyrinogen III synthase HEM4 |
Protein accession | YP_578187 |
Protein GI | 92118458 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGTCGC TCGCCAACAT GCGGATCATG GTGCCGGAAA GCCGCGAACT GGATTTGTTC GCCGCCATGC TGGAAGCGGA AGGGGCAACG GCGCTGCGCT GCCCGCTGGT CAAGATCCTG CCATTGCACG ACACGGCGGA GCCGGATGCC TGGATCGACA GCGCCATCCG CGGCGAGTTC GACGAACTGA TCCTGCTGAC GGGCGAAGGG TTGCGCCATC TTCTGACGAT CAGCGGCGCA CGGCGCGACG GCTTCATCGC GGCCCTGAAG CGCATGCGAC TGACGGTGCG CGGACCGAAG CCCACGCGGG CGTTGCGCGA GATCGGCCTG TCGCCGGATG TCACCGCGCC TGTTCCCACT TCGGAAGGCG TGCTGGAAAC CTTTGCCGGG GCCGATCTGT CAGGTCGCCT GATCGGGGCC CAGTTGTATC CGGGTGGTGG GGCAGAGAAG ATGGTAAGCG CCTTACGTCG GCAGGGCGCG AAGGTCTTTC CCGTGACACC CTATCGCTAT GCCTCGGAAA CCGAGATGGC GCAGGTGGCC GATTTCATCC ACGAGCTGGC AGCCGGGAGA ATGACCATGG TCGCCTTTAC CGCCTCGCTG CAGATCGAGC GCCTGATGTG GGTGGCCAAG GAAGCAGGGC TGGAGGCCCA GTTGAAGCTG GGCCTGTCAC GCACGCCAAT CGCCTCGGTG GGGCCGGTGA TGCAAAAGGC GCTGCAGAAA TACGGTTATG AGGCGGCCGT GCAGCCGGAA AACTCATACC ATCTCAAGCC GCTGGTGCGC GCCATCGCCC GCTGGCGCCA ATCTCAGTGA
|
Protein sequence | MTSLANMRIM VPESRELDLF AAMLEAEGAT ALRCPLVKIL PLHDTAEPDA WIDSAIRGEF DELILLTGEG LRHLLTISGA RRDGFIAALK RMRLTVRGPK PTRALREIGL SPDVTAPVPT SEGVLETFAG ADLSGRLIGA QLYPGGGAEK MVSALRRQGA KVFPVTPYRY ASETEMAQVA DFIHELAAGR MTMVAFTASL QIERLMWVAK EAGLEAQLKL GLSRTPIASV GPVMQKALQK YGYEAAVQPE NSYHLKPLVR AIARWRQSQ
|
| |