Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2907 |
Symbol | |
ID | 4032716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 3198102 |
End bp | 3199361 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637971353 |
Product | lytic murein transglycosylase |
Protein accession | YP_578135 |
Protein GI | 92118406 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00384292 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGCGA TCGGCTGGAA CGCTCTGCGG CGGCTGCGGC TTGCGATCGC GATCATGGTC GCGCTCGCTC TTGGAGCCGG AGTGCCGCCG GCGCACGCGG CGGACGCCGG TTTTGCGCGT TTCATCGCCG CGATCTGGCC CGAGGCGCAG CGGGCGGGCG TCTCACGCGC AACCTTCGAC TCCGTAACGA CAGGGCTCGA ACCCGATTAC AAACTGCCCG ACCTGATCCT GCCCGGTCGG CCCGCGACCG GCGCGCCGTC GCAGGCGGAA TTCGTTCAGG TGCCGGCGGA TTACCTCAAG GAGAAGAGCA TCGCGCGGCT GGCGGCCCAG GGGCAGCGGC TGATGCAGAC ATACGGGCCG ACGCTGAACG CGATCGAAAA GCGCTTCGGC GTACCCGCAA CCATCATCCT TGCCATCTGG GGCCGCGAGA CCGACTACGG CCGCTACGCG CTGCCTTACG ATGCGATGCG CGTGCTGGCG ACACAGGCCT ATGTCGGCCG CCGCAAGGAG CAGTATCGCA CCGAATTCAT CGACGGGCTG CTGCTATTGC AGCGCGGAGA CGTCTCGCGC AAGAATTTCC GCGCGTCGTG GGGCGGCGCC ACCGGCCTCA CGCAATTCCT GCCGTCCGAA CTTGCCAAAC ATGGCGTCGA TTTCGATGGC GACGGCCGCG TCGATATCTG GACCTCGGTG CCCGACGCGC TGGCCTCGGC CGCGCAGCAA CTCGTCAACA AGGGTTGGCG GCCAGGGTTG CGCTGGGCCT ATGAGGTACG CGCGCCGGCG AACGTCGATT GCACGGAAGG CGTGCCGGAG GTGACGAAGC CGATCGGCGA ATGGCTGCGC GAAGGGTTTT TGCCGGTTCG CGGGCAAAAG CTGACCGCGG CCGAGCGGGC GCAACCGGCG TCGCTATTGC AGCCGGAAGG CATCTATGGC CCGTCGTTCC TGACCACGAA GAACTACTTC GTGATCAAGG AATACAATTT CTCCGACCTC TACGTGCTGT TCGTCGGCCA TCTCGCCGAC CGCATGACCA GTCCGCTGCC GTTCGCGACG CCGTGGTCGG CTTCGACGCA ATTGCGCAGC CGCGACGTCG AGGCGATGCA GCGCCATCTG ACGCGGATCG GCCTGTACAA GGACAAGATC GACGGCAAGG CGGGGATGCT GACGCGCGCG GCGCTCGGCG CCTACCAGAA ATCGGCCGGT CTCAAAGTTG ATTGCTGGCC CAGCGACGCG GTGCTGCGTG CGATGAGCGC GGCGCGCTGA
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Protein sequence | MAAIGWNALR RLRLAIAIMV ALALGAGVPP AHAADAGFAR FIAAIWPEAQ RAGVSRATFD SVTTGLEPDY KLPDLILPGR PATGAPSQAE FVQVPADYLK EKSIARLAAQ GQRLMQTYGP TLNAIEKRFG VPATIILAIW GRETDYGRYA LPYDAMRVLA TQAYVGRRKE QYRTEFIDGL LLLQRGDVSR KNFRASWGGA TGLTQFLPSE LAKHGVDFDG DGRVDIWTSV PDALASAAQQ LVNKGWRPGL RWAYEVRAPA NVDCTEGVPE VTKPIGEWLR EGFLPVRGQK LTAAERAQPA SLLQPEGIYG PSFLTTKNYF VIKEYNFSDL YVLFVGHLAD RMTSPLPFAT PWSASTQLRS RDVEAMQRHL TRIGLYKDKI DGKAGMLTRA ALGAYQKSAG LKVDCWPSDA VLRAMSAAR
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