| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2880 |
|---|
| Symbol | |
|---|
| ID | 4032894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 3175622 |
|---|
| End bp | 3176587 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637971326 |
|---|
| Product | thioredoxin reductase |
|---|
| Protein accession | YP_578108 |
|---|
| Protein GI | 92118379 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase |
|---|
| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.805293 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCTC CCGCCCACGC CAAGGTTGTC ATCATCGGCT CTGGTCCAGC AGGCTATACG
GCGGCGATCT ACGCGGCGCG TGCCATGCTG GAGCCGGTGC TGATCCAGGG CATCCAGCCC
GGCGGCCAGC TCACCATTAC GACCGATGTC GAAAACTATC CCGGCTTTGC GGACGTGATC
CAGGGGCCGT GGCTGATGGA GCAGATGGAA AAGCAGGCGA CGCATGTCGG CACCAGGATC
GTGACCGATA CGGTGAATTC ACTCGATGTG TCGCAGCGGC CGTTCCGGCT GACCTGCGAT
AGCGGTGACG TCTACCTTGC CGAGACCGTG ATCCTTGCTA CCGGCGCGCA GGCGCGCTGG
CTCGGTCTGC CGTCCGAGGA CAGCTTCAAG GGATTCGGCG TCTCGGCCTG CGCTACCTGC
GACGGCTTCT TCTATCGCGG CAAGAACGTG ATCGTGGTCG GCGGCGGCAA TACCGCGGTT
GAGGAAGCGC TGTTCCTGAC CAATTTCGCC ACGCAGGTCA CCCTCGTTCA TCGCCGCGAT
CACTTCCGCG CCGAACGCAT CCTGCAGGAT CGTGCATTCA AGCATCCCAA GATCAAGGTG
GTCTGGGACA GCGCCCTCGA CGAAATCTGC GGCACTGAGG ATCCGCCCAA GGTCACCCAC
GTCCGGCTGA AGAACGTCAA GACCGGCGCC CTCACCGAGG TCGCGGCCGA CGGCGTGTTC
ATCGCGATCG GTCACGCGCC AGCCACCGAG CTGGTGGCGG GCAAGGTCAA GCTGAAAAGC
TCGGGCTACA TCGAGGTTGC GCCGAACTCA ACGGCAACGT CGGTGCCCGG CCTGTTCGCA
GCCGGCGATG TCGCCGACGA GGTTTATCGC CAGGCAGTCA CGGCCGCGGG CCTTGGCTGC
ATGGCAGCAC TGGAGGCCGA ACGGTTTCTC GCCGCGCATG CGAGCGACCG CGCGGCTGCG
GAGTAA
|
|---|
| Protein sequence | MPAPAHAKVV IIGSGPAGYT AAIYAARAML EPVLIQGIQP GGQLTITTDV ENYPGFADVI
QGPWLMEQME KQATHVGTRI VTDTVNSLDV SQRPFRLTCD SGDVYLAETV ILATGAQARW
LGLPSEDSFK GFGVSACATC DGFFYRGKNV IVVGGGNTAV EEALFLTNFA TQVTLVHRRD
HFRAERILQD RAFKHPKIKV VWDSALDEIC GTEDPPKVTH VRLKNVKTGA LTEVAADGVF
IAIGHAPATE LVAGKVKLKS SGYIEVAPNS TATSVPGLFA AGDVADEVYR QAVTAAGLGC
MAALEAERFL AAHASDRAAA E
|
|---|
| |