Gene Nham_2769 details

Gene Information

• Locus tag: Nham_2769
• ID: 4031200
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 3052517
• End bp: 3053068
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637971221
• Product: dTDP-4-dehydrorhamnose 3,5-epimerase
• Protein accession: YP_578007
• Protein GI: 92118278
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
• TIGRFAM ID: [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTTT CGCAGACGCC GATTTCTGGC CTGTTCGTCA CCGAAAGTCT CGCGCTCGGT 
GATGCACGTG GGAAGTTCTC GCGCATCTTC TGCGAGCGCG AACTCGCCGC CGCCGTCGGG 
GCGCGCACGA TCCGTCAAGC GAATGTTTCA TCGACTGCAG TGGTGGGCGC GATTCGCGGC 
ATGCATTACC AGCACGCGCC GCGCGCCGAA ATGAAGATCG TCCGCTGCAT CCAGGGACGG 
GTATTCGATG TCGCTGTCGA TCTGCGGCGG GGCTCTCCAA CCTTTCTGCA CTGGCATGGT 
GCCGAGCTGT CCCAGGAAAA CGGTATGGCC TTCATCATTC CCGAGGGATG CGCGCACGGC 
TTCCAGGTGC TCGAGCCCAA TTCCAGCCTT CTCTACTTTC ATACCGAATT CTACTCACCA 
GAACATGAGG CCGGCGTGCG TCATGACGAT CCGCGCGTGG CCATCGCATG GCCGCTGCCG 
CCGACCAATC TCTCCGTGCG GGATGCTAGC CATCCCCCTC TCGATGAAAG TTTCCAAGGA 
GTTTCCCTAT GA 

 

Protein sequence

MKLSQTPISG LFVTESLALG DARGKFSRIF CERELAAAVG ARTIRQANVS STAVVGAIRG 
MHYQHAPRAE MKIVRCIQGR VFDVAVDLRR GSPTFLHWHG AELSQENGMA FIIPEGCAHG 
FQVLEPNSSL LYFHTEFYSP EHEAGVRHDD PRVAIAWPLP PTNLSVRDAS HPPLDESFQG 
VSL