| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2680 |
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| Symbol | |
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| ID | 4032454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2946875 |
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| End bp | 2948044 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637971132 |
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| Product | radical SAM family protein |
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| Protein accession | YP_577919 |
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| Protein GI | 92118190 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR03470] hopanoid biosynthesis associated radical SAM protein HpnH |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.150776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATAC CGTTTTTTAA AGAACTGAAG ATCGGCGGAT ATCTGATCAA GCAGAAGATG
CTGGGTCGCA AGCGCTATCC GCTTGTGCTG ATGCTCGAGC CGCTGTTCCG CTGCAATCTC
GCCTGCGCCG GATGCGGCAA GATCGACTAT CCCGATGCGA TCCTCAACCG CCGCATGACC
GCTCAGGAAT GCTGGGACGC TGCCGAGGAA TGCGGCGCGC CGATGGTTGC AATTCCCGGC
GGCGAGCCGC TGATCCACAA GGAGATCGGC GAAATCGTGC GCGGTCTCGT CGCGCGCAAG
AAGTTCGTCT CGCTCTGCAC TAATGCGCTT CTGCTGGAGA AGAAGCTCGA TCTGTTCGAG
CCCTCGCCCT ATCTGTTCTT CTCGGTCCAT CTCGATGGCC TGAAGGAGCA CCACGACGAG
TCGGTATGCC AGACGGGCGT GTTCGATCGT GCCGTCTCCG CGATCAAGGC GGCGAAGGCG
CGCGGCTTCA CCGTCAACGT CAACGCCACG ATCTTCGACA ACTATCCGGC CGAAGAGATC
GCAAAGTTCC TCGACTTCAC GACCGAGCTT GGCGTCGGCG TCTCGATGTC GCCGGGCTAC
GCCTATGAGC GCGCGCCCGA TCAGGAGCAC TTCCTGAACC GCACCAAGAC CAAGAAGCTG
TTCCGCGACG TGTTCGCGCG CGGCAAGGGC AAGAAGTGGA ACTTCATGCA CTCCGGCCTG
TTCCTCGACT TTTTGGCCGG CAATCAGGAA TATCACTGCA CGCCATGGGG GATGCCCGCG
CGCAACATCT TCGGCTGGCA GAAACCCTGC TACCTGCTCG GCGAGGGCTA CACCAAGACC
TTCAAGGAAT TGATGGAAAC CACCGACTGG GACAGCTACG GCACCGGCAA ATACGAAAAG
TGCGCCAACT GCATGGCGCA TTGCGGTTAC GAGCCGACCG CGGCCACTGC GGCGCTGAAC
AATCCACTCA AGACGATGTG GGTGGCGCTG CGCGGCGTTC GGACCACCGG ACCGATGGCG
CCCGAGATCG ATCTGACCAA GCAGCGTCCG GCGCAGTACA TTTTCGCCCA GCAGGTTGAG
AAAACGCTGA CGGAGATCCG CAAGGACGAG GCTGCGGCCG CCGCTGCCAA ACAAGCGGCA
AAAGAGCAAA AGGCTTCCAC CGCAGCCTGA
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| Protein sequence | MAIPFFKELK IGGYLIKQKM LGRKRYPLVL MLEPLFRCNL ACAGCGKIDY PDAILNRRMT
AQECWDAAEE CGAPMVAIPG GEPLIHKEIG EIVRGLVARK KFVSLCTNAL LLEKKLDLFE
PSPYLFFSVH LDGLKEHHDE SVCQTGVFDR AVSAIKAAKA RGFTVNVNAT IFDNYPAEEI
AKFLDFTTEL GVGVSMSPGY AYERAPDQEH FLNRTKTKKL FRDVFARGKG KKWNFMHSGL
FLDFLAGNQE YHCTPWGMPA RNIFGWQKPC YLLGEGYTKT FKELMETTDW DSYGTGKYEK
CANCMAHCGY EPTAATAALN NPLKTMWVAL RGVRTTGPMA PEIDLTKQRP AQYIFAQQVE
KTLTEIRKDE AAAAAAKQAA KEQKASTAA
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