Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2671 |
Symbol | |
ID | 4032445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 2936219 |
End bp | 2937403 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637971123 |
Product | peptidase M20D, amidohydrolase |
Protein accession | YP_577910 |
Protein GI | 92118181 |
COG category | [R] General function prediction only |
COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00976662 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCATCG TCAACCGCGT TGCCGATCTG CAATCCGATA TCGCTGGCTG GCGCCGGGAT ATCCATCAGC ACCCGGAGCT GCTGTACGAT GTGCATCGTA CCGCGGCGTT TGTCGCGGAT CGCTTGCGGG AGTTCGGCTG CGACGAGGTC GCGACCGGGC TCGGCAGGAC CGGCGTCGTC GGCGTCATCA AGGGCAGGAA GCCGGCCAGC GACAGCGATG GAGACGGCGG GGTCAAGGTG ATCGGCCTGC GCGCCGATAT GGATGCGCTG CCGATTCAAG AGGCAACCAA CCTGCCTTAC GCCTCGAAGA CGTCCGGCAA GATGCACGCC TGCGGCCATG ACGGCCACAC CGCGATGCTG CTCGGCGCCG CGCGCTATCT CGCGGAGACG CGGAATTTCA CTGGGGAGGC GGTCGTGATC TTCCAGCCGG CGGAAGAGGG CGGCGCCGGT GCTGCCGCGA TGATCAAGGA CGGGTTGATG GACCGTTTCG GGATCGATCA GGTCTACGGT ATGCATAACT TCCCCGGCAT CCCGCTCGGC TCCTTCGCCA TCCGGCCGGG TCCGATCATG GCGGCGACCG ACGCCGTCGA TTTCAGGATC GAGGGCCACG GCGGCCACGC CGCTCGGCCG CATCTCTGCA TCGATCCGGT GCTGGCCGGC GCGCAGCTTG TCGTTGCCCT GCAATCGATC GTGTCGCGCA ACGTCGATCC GCTGGAATCC GCCGTGATTT CGGTGTGTGA GTTCCACGCC GGCAACACCC GCAACGTCAT TCCGCAGACC GTCGAGTTGC GCGGCACCGT CCGCAGCCTG AAGGCCGACG TGCGCGACCT GGTGGAGAAG CGGATTCGCG AGGTCGCCGC CGGCGTGGCG CAGATCACTG GAACCAGGAT CGATGTCAAA TTCGGGCGCG GCTATCCGGT CACGGTCAAT CACGCCGCGC AGACCGAAAC CGCGATCAGG ATCGCGAAGG AGATCGCCGG CGACAACAAT GTGCATGAGA CGCCGCCGAT GATGGGCGCG GAGGATTTCG CCTACATGCT GGAAGCCCGG CCCGGCGCCT TCATCTTCGT CGGCAATGGC GACAGCGCCG GCCTGCATCA TCCCGCCTAC AACTTCAACG ACGACGCCAT CGTCTACGGC ACCTCGTACT GGATCAGGCT GGTCGAGACC ACGCTGGCTG CCTGA
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Protein sequence | MPIVNRVADL QSDIAGWRRD IHQHPELLYD VHRTAAFVAD RLREFGCDEV ATGLGRTGVV GVIKGRKPAS DSDGDGGVKV IGLRADMDAL PIQEATNLPY ASKTSGKMHA CGHDGHTAML LGAARYLAET RNFTGEAVVI FQPAEEGGAG AAAMIKDGLM DRFGIDQVYG MHNFPGIPLG SFAIRPGPIM AATDAVDFRI EGHGGHAARP HLCIDPVLAG AQLVVALQSI VSRNVDPLES AVISVCEFHA GNTRNVIPQT VELRGTVRSL KADVRDLVEK RIREVAAGVA QITGTRIDVK FGRGYPVTVN HAAQTETAIR IAKEIAGDNN VHETPPMMGA EDFAYMLEAR PGAFIFVGNG DSAGLHHPAY NFNDDAIVYG TSYWIRLVET TLAA
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