Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2638 |
Symbol | |
ID | 4032838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 2898388 |
End bp | 2900550 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637971092 |
Product | methylmalonyl-CoA mutase |
Protein accession | YP_577879 |
Protein GI | 92118150 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATGA CCCGCATTCC GAATTTCGCC GATGTCGCCT TCGCGCCGGT CGCGGCGCCC GCCGCCGCCG GCAATGCAGA ACCGTGGCTG ACACCCGAGG GCATCCCGGT CAAATCCACC TACGGCGAAA CCGACCTCGA TGGCATCGAC TTCCTCGACA GATGGTCCGG CATCGCGCCT TACTTACGCG GTCCCTACCC GACCATGTAT GTCAACCAGC CCTGGACCAT CAGGCAATAT GCGGGGTTCT CGACGGCCGA GGATTCCAAC GCCTTCTATC GCCGCAACCT CGCCGCCGGC CAGAAGGGAC TGTCGGTCGC GTTCGACCTC GCCACCCATC GCGGCTACGA CTCGGATCAC CCCCGCGTGT CGGGCGACGT CGGCATGGCG GGCGTCGCTA TCGACTCCAT CTACGACATG CGCACGCTGT TCGCCGGCAT CCCGCTCGAC CGGATGAGCG TGTCGATGAC CATGAACGGC GCGGTGCTGC CGATCCTGGC GCTGTTCGTC GTCGCCGCCG AGGAACAGGG CGTGCCGCCT TCGAGCCTGT CGGGCACCAT CCAGAACGAC ATTCTCAAAG AATTCATGGT GCGCAACACC TACATCTATC CACCTGCACC CTCGATGCGG ATCGTCTCCG ACATCTTCGC CTACACCTCC CGAAAGATGC CGAAGTTCAA CTCCATTTCC GTCTCCGGCT ACCACATGCA GGAAGCCGGC GCGACGCAGG ACCTCGAGCT CGCCTATACG CTTGCCGACG GCGTCGAATA TGTCCGAGCC GGACTCGCGG CCGGGCTCGA TATCGACCGT TTCGCGCCGC GGCTGTCGTT CTTCTGGGCG ACCGGCATGA ACTTCTTCAT GGAAGTCGCC AAGATGCGCG CCGCGCGGCT GCTGTGGGCC AAGCTCATGA AGCCCTTCAA TCCGAAGAAT CCGCGTTCGC TCTCCTTGCG CACCCATTGC CAGACCTCCG GCTGGTCGCT GACCGCGCAG GACGTCTTCA ACAACGTGAT CCGCACCGCG ATCGAGGCGA TGGCGGCGAC GCAAGGTCAC ACCCAGTCGC TGCACACCAA CGCGCTCGAC GAGGCGCTGG CGCTGCCGAC CGACTTCTCC GCCCGCATCG CCCGCAATAC CCAGCTTTTC CTGCAGCACG AGAGCGGCAC CACGCGCATC ATCGATCCCT GGGGCGGCTC CTATTATGTC GAGCGGCTCA CGCATGATCT CGCCGTGAAG GCGTGGGGCC ATATCCGGGA AGTCGAGGAA CTCGGCGGCA TGGCCAAAGC CATCGAGGCC GGCATACCGA AGCTACGCAT CGAGGAGGCG GCCGCCAGGA CGCAGGCGCG GATCGATGCC GGCAAGCAGG CGGTAATCGG CGTCAACAAA TACAGGCCGG AGAACGAGGC GCCGATCGAC GTGCTGAAGG TCGACAATTC GACGGTGCGG CGCTTGCAGA TCGACAAGCT GAAACGGTTG CGCAGCGAGC GCAAGCAGGA AGACGTCGAT GCCGCCCTCG CGGCGCTAAC GCGCTCGGCC GGCGACGGCA ACGGCAACCT GCTGGCGCTC GCCATCGACG CGGCGCGCGC CAAGGCCACC GTGGGCGAAA TTTCCGACGC GATGGAGAAG GTGTTCGGCC GGCATCGCGC CGAAATCAGA TCCATCACCG GGGTTTACAA GCGTGAGGCG GCCGCCATGT CCGACAAGGT TTCGAAAGTG CAGGCGCTGA TCGACGCCTT CGAGGAGGCC GAGGGCCGCC GCCCGCGCAT CCTCGTCGCC AAGATCGGCC AGGACGGCCA CGACCGCGGC CAGAAGGTGA TCGCGTCCGC CTTCGCCGAT ATCGGCTTCG ACGTCGATAT CGGACCGTTG TTTGCAACAG CGGAAGAAGC CGCGCGGCAG GCGGTGGAAA ACGACGTGCA CATCCTTGGC GTGTCCTCGC TCGCCGCCGC GCACTTGACC ACCGTGCCGG AATTGAAGGC CGCGCTGAAA AGCCACGGCC GTGACGACAT CATGATCATC GTCGGCGGCG TGGTGCCGCC ACAGGACTAC GACGCGCTCT ATAAGGCCGG CGCCGAAGCG ATCTTCCCGC CGGGTACGGT GATCGCCGAG GCGGCGGAAG AATTGATCCG CAAGCTCAAC GCGCGGCTCG GCCACAACGA GGCGGCGGGG TAG
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Protein sequence | MTMTRIPNFA DVAFAPVAAP AAAGNAEPWL TPEGIPVKST YGETDLDGID FLDRWSGIAP YLRGPYPTMY VNQPWTIRQY AGFSTAEDSN AFYRRNLAAG QKGLSVAFDL ATHRGYDSDH PRVSGDVGMA GVAIDSIYDM RTLFAGIPLD RMSVSMTMNG AVLPILALFV VAAEEQGVPP SSLSGTIQND ILKEFMVRNT YIYPPAPSMR IVSDIFAYTS RKMPKFNSIS VSGYHMQEAG ATQDLELAYT LADGVEYVRA GLAAGLDIDR FAPRLSFFWA TGMNFFMEVA KMRAARLLWA KLMKPFNPKN PRSLSLRTHC QTSGWSLTAQ DVFNNVIRTA IEAMAATQGH TQSLHTNALD EALALPTDFS ARIARNTQLF LQHESGTTRI IDPWGGSYYV ERLTHDLAVK AWGHIREVEE LGGMAKAIEA GIPKLRIEEA AARTQARIDA GKQAVIGVNK YRPENEAPID VLKVDNSTVR RLQIDKLKRL RSERKQEDVD AALAALTRSA GDGNGNLLAL AIDAARAKAT VGEISDAMEK VFGRHRAEIR SITGVYKREA AAMSDKVSKV QALIDAFEEA EGRRPRILVA KIGQDGHDRG QKVIASAFAD IGFDVDIGPL FATAEEAARQ AVENDVHILG VSSLAAAHLT TVPELKAALK SHGRDDIMII VGGVVPPQDY DALYKAGAEA IFPPGTVIAE AAEELIRKLN ARLGHNEAAG
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