| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2616 |
|---|
| Symbol | |
|---|
| ID | 4031139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 2873950 |
|---|
| End bp | 2874684 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637971071 |
|---|
| Product | cytochrome c biogenesis protein, transmembrane region |
|---|
| Protein accession | YP_577858 |
|---|
| Protein GI | 92118129 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0785] Cytochrome c biogenesis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCACG ACGTTTCCGT TCCTGCCGCG CTGGTCGCGG GCCTTGTCAG TTTCCTGTCG
CCCTGCGTTC TGCCGCTGGT GCCTCCCTAT CTGGTCTATC TCACCGGCGC GACCATCGAA
CACGTGTCCC ACGACGAGAC GGCCAAGGTC TCGAAGCGGG CCGTGATGCT GGCCGCATTG
GTGTTCGTGC TCGGCTTTTC CACGGTGTTC GTCGCGCTGG GCGCCAGCGC CAGCTTCATC
GGCGGCCTCA TCCGGGCCTG GTCGGCGCAA CTGTCGATCG TCGCCGGCAT CGTTATCATC
GTCATGGGCC TGCACTTTCT GGGGCTGACG CGGATTGGCT TTTTGATGCG CGAAGGACGG
CTCACCGCGC CGAAGCCGGT CGGCCTGTGG GGCGCCTATG TGATGGGGCT CGCCTTCGCG
TTCGGCTGGA CGCCGTGTAT CGGGCCGATC CTTGCGGCGA TCCTGTCGGT AGCGGCGGCA
GAGGCCACTG TCGTGAAGGG GGCCGGGTTG CTTGCGGTAT ATTCGGCAGG GCTCGGCATC
CCGTTCCTGC TGGCGGCATT GATGATCGAA CAGTTCGCCT CGCTGCTAAA GCGCATGAAG
CGTCACCTCA ATACGGTGGA GCGCGTCATG GGCGTGCTGA TGGTGCTCAC TGGCATCGCG
TTCCTCACCG GCACCATTTC GAACGTCAGT ATCTGGTTGC TGGAGGCCTT TCCGGCGCTG
CAGAATTTCG GATGA
|
|---|
| Protein sequence | MIHDVSVPAA LVAGLVSFLS PCVLPLVPPY LVYLTGATIE HVSHDETAKV SKRAVMLAAL
VFVLGFSTVF VALGASASFI GGLIRAWSAQ LSIVAGIVII VMGLHFLGLT RIGFLMREGR
LTAPKPVGLW GAYVMGLAFA FGWTPCIGPI LAAILSVAAA EATVVKGAGL LAVYSAGLGI
PFLLAALMIE QFASLLKRMK RHLNTVERVM GVLMVLTGIA FLTGTISNVS IWLLEAFPAL
QNFG
|
|---|
| |