Gene Nham_2541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2541 
Symbol 
ID4033217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2799693 
End bp2800742 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content60% 
IMG OID637970995 
Productfatty acid desaturase 
Protein accessionYP_577783 
Protein GI92118054 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCAAC ACGCGATCAA TATTCACACC ACGTCCGATT CCAGGGCGCT GGCACAGGCT 
CTCGCCCGCT ATCGCGAACC GGATTCCGCG CGAAGCGTCT TCGAGGTCGT GATCACGGCA
GCGCCGTTTG CCCTCCTGTG GGTTCTGATA TGGGCGGCCC TCGATGCCGG CTATTGGATT
GGCCTGCTGC TTGCCGTGCC GGCTGCAGGC CTCCTCGTGC GTCTCTTCAT GATCCAGCAC
GATTGCGGCC ACGGATCGTT CTTCCGCCAC CGCCTCACGA ACGATTGGGT TGGGCGTATC
ATCGGCGTGC TGACATTGAC GCCGTACGAC GTCTGGCGGC GCGCCCACAC CTTGCATCAT
GCAGGCTCAG GCAATCTCGA TCGCCGTGGA ATCGGCGACA TCGATACACT GACCGCGCGC
GAATTCCTGG CGCTGCCCAA GGGACGCCGG CTGTTGTACC GCTTGTACCG GCATCCGATC
GTGATGTTCG GCATAGGCCC CGCGTATCTA TTCATCTTGC AGCACCGGCT GCCGATGGGA
CTGATGCGCA GCGGCTGGCA ACCCTGGATA AGCGCGATGG CGACAAATGT CGCAATCGCG
GTTCTGGCCG CGACCCTGAT CTGGCTGGTC GGCGTCGGTC CATTCCTCCT TGTACAGTTG
CCGATCACCC TTCTCGCCGC CTCGATCGGC GTCTGGCTGT TCTATGTCCA GCACCAGTTC
GAGGACACGT TTTGGGCTCA TGACGAAAGG TGGAATTTTC ACGAAGCCGG ACTGCACGGC
AGCTCGCACT ATGACCTGCC AATCGTCTTG CGCTGGTTTA CCGCTAATAT AGGCGTCCAC
CACGTCCATC ATCTGTGCAG CCGGATTCCT TATTATCGGC TGCCACAGGT GTTGCGGGAT
CATCCGCAGC TTGCTGCCGT CGGACGACTG ACCCTGTTCC AGAGCCTTCG CTGTGTGCGC
AAGGTTCTTT GGGATGAGGG CCGGCAAAAG CTTGTTTCAT TCCGCGAGAT GGCGTCTGTC
CGGCCGCCTG CATCGCCGTA TTTCTTGTGA
 
Protein sequence
MDQHAINIHT TSDSRALAQA LARYREPDSA RSVFEVVITA APFALLWVLI WAALDAGYWI 
GLLLAVPAAG LLVRLFMIQH DCGHGSFFRH RLTNDWVGRI IGVLTLTPYD VWRRAHTLHH
AGSGNLDRRG IGDIDTLTAR EFLALPKGRR LLYRLYRHPI VMFGIGPAYL FILQHRLPMG
LMRSGWQPWI SAMATNVAIA VLAATLIWLV GVGPFLLVQL PITLLAASIG VWLFYVQHQF
EDTFWAHDER WNFHEAGLHG SSHYDLPIVL RWFTANIGVH HVHHLCSRIP YYRLPQVLRD
HPQLAAVGRL TLFQSLRCVR KVLWDEGRQK LVSFREMASV RPPASPYFL