| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2538 |
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| Symbol | |
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| ID | 4033214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2796630 |
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| End bp | 2798489 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637970992 |
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| Product | ABC transporter related |
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| Protein accession | YP_577780 |
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| Protein GI | 92118051 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGGAG GGCCGACTTT GCCGAATGCC CGATCCTTCC GGGAGCGGTT CGGCGCACTC
AGGAATCTTC GGCCTTTCCT TGCGATGGTG TGGCGCACAA GCCCGGGCCT GACCGCGGCG
ACGCTGGTGT TGCGGCTGAA GCGGGCGCTG CTGCCGATCG TCACACTCTA TATAGGCAAG
CTGATCATCG ACGAAGTCGT GGCTCTGGTG CAGGTACCGG ACAAGCCGGG GACGCTACAG
GAATGGCTCG ACAGCGGCCT CGCGAACTGG CTCGGCATTC TCCTTATTGC AGAGTTCGCG
CTCGCCATCC TCGCCGACAT TCTCGGGCGC ATCGTCTCGC TCATCGACAG CCTGCTCTCG
GAACGCCTGT CCAATGCCCT GAGCGTACGC CTGATGGAGC ACGCCGCGAC GCTCGACCTG
GAGGATTTCG AGGACGCAGA ATTCCAGGAT CAGCTCGAGC GCGCGCGCCG CCAGACCAGC
GGCCGGATGA CGTTGCTCGG ACAATTGCTC GCGCAGGTGC AGGACATCGT GACCGTGGTG
AGCTTCGCCG CTGGCCTGAT CATCTACGCG CCTTGGCTGA TCTTGCTCCT GGTTGTGGCG
CTGGTGCCGG CCTTCCTCGG CGAGGCGCAT TTCAACGCAC AGAGCTATTC GCTCGACTAT
GCCCGCACGC CGGAACGGCG CGAACTCGAC TATGTGCGGC AAACCGCGGC GAGCGTCGAG
ACCGCCAAGG AGGTCAAGAT CTTCGGCCTC AACGGCTTCC TGATCGACCG CTATGTGCGG
CTTGCCACGG CCTTCTACGC GGCCAATCGC AGGCTCGCGC TGCGGCGCGC CGGCTGGGGC
GGGCTGTTCA CCGCGGTCGG CACGATCGGC TATTACGTCG CCTATGCCTA TATCGCCTGG
CGCACGCTCG CGGGCGCGTT CTCGATCGGC GACCTCACCT TCCTCGCCGG CTCGTTCCGG
CGCCTGCGCA ACCTGATCGA GGGGCTGCTC GCGAGTTTCT CGAGCACCGC GGGCCAGGCG
CTCTATCTCG ACGACCTGTT CAGCTTCTTC GAGGTCAAGC CGGAAATCCT GTCGCCGGAC
AATCCGCAGC CGTTTCCGCT GCCGATCCGC GAGGGCTTCG TATTCGAAGA CGTGGGCTTC
CGCTATCCGG GTGCGGAGCG CTGGGCCGTG CGGCATCTCA GTTTCACGCT CCATGCCGGC
GAAGTCCTCG CGCTCGTCGG CGAGAACGGT GCGGGCAAGA CCACGCTCGT GAAGCTCCTC
ACCCGCCTCT ACGATCCGGA CGAAGGCCGC ATCCTGCTCG ACGGCCGCGA CCTGCGCGAA
TACGACCTCG ACGCACTGCG CGGGAACATG GGTGTGATCT TCCAGGATTT CGTCCGCTAT
AATCTCAGCG CCGCCGACAA TATCGCGGTG GGACGGATAG ACGCGCGGGA CGACCGCGCA
CGCGTCGCGC GGGCGACGGA GCGCAGCCAG GCCGACGAGG TCATGGCGAA GCTCCCCGCG
AACTACGACC AGATGATCGG CAAGCGATTC CGCAACGGCG TCGAGCTTTC GGGCGGCGAA
TGGCAGAAGA TCGCGATCGC ACGCGCCTAT ATGCGCAAGG CGGAGGTGCT AATCCTCGAC
GAGCCCACAG CCGCGCTCGA CGCCCGCTCC GAATACGAAG TATTCCGGCG CTTCAAGGAG
CTGAGCCAAG GCAAGACCGC GATCCTGATC TCGCACCGCT TTTCCAGCGT GCGCATGGCG
GACCGCATCC TTGTGCTTGC CGACGGCACG GTCGAAGCCT CTGGGACGCA TGAGGAACTT
GTCTCGCAGG CGGGTCGCTA TGCCGAGCTC TTCGAGTTGC AGGCCGCTGG CTATCGATAG
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| Protein sequence | MPGGPTLPNA RSFRERFGAL RNLRPFLAMV WRTSPGLTAA TLVLRLKRAL LPIVTLYIGK
LIIDEVVALV QVPDKPGTLQ EWLDSGLANW LGILLIAEFA LAILADILGR IVSLIDSLLS
ERLSNALSVR LMEHAATLDL EDFEDAEFQD QLERARRQTS GRMTLLGQLL AQVQDIVTVV
SFAAGLIIYA PWLILLLVVA LVPAFLGEAH FNAQSYSLDY ARTPERRELD YVRQTAASVE
TAKEVKIFGL NGFLIDRYVR LATAFYAANR RLALRRAGWG GLFTAVGTIG YYVAYAYIAW
RTLAGAFSIG DLTFLAGSFR RLRNLIEGLL ASFSSTAGQA LYLDDLFSFF EVKPEILSPD
NPQPFPLPIR EGFVFEDVGF RYPGAERWAV RHLSFTLHAG EVLALVGENG AGKTTLVKLL
TRLYDPDEGR ILLDGRDLRE YDLDALRGNM GVIFQDFVRY NLSAADNIAV GRIDARDDRA
RVARATERSQ ADEVMAKLPA NYDQMIGKRF RNGVELSGGE WQKIAIARAY MRKAEVLILD
EPTAALDARS EYEVFRRFKE LSQGKTAILI SHRFSSVRMA DRILVLADGT VEASGTHEEL
VSQAGRYAEL FELQAAGYR
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