Gene Nham_2458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2458 
Symbol 
ID4033149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2717275 
End bp2718552 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content62% 
IMG OID637970917 
ProductO-acetylhomoserine aminocarboxypropyltransferase 
Protein accessionYP_577708 
Protein GI92117979 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2873] O-acetylhomoserine sulfhydrylase 
TIGRFAM ID[TIGR01326] OAH/OAS sulfhydrylase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATC GCATTCCCGG CTTTGCAACG CTTGCCGTCC ACGCCGGCGC GCAGCCCGAT 
CCGACCACGG GCGCACGCAC GACGCCTATC TACCAAACCA CGTCGTTCGT GTTCAACGAT
GCCGACCACG CGGCGTCGTT GTTCGGATTG CAGTCATTCG GCAATATCTA CACCCGCATA
GGAAATCCAA CCAACGCCGT GCTGGAGGAG CGCGTTGCCG CCCTCGAAGG CGGCACCGCC
GCGCTCGCGG TGGCCTCGGG GCACGCCGCG CAGGTCGTCA CGCTCCAGCA GTTATTGAAA
CCCGGCGACG AAGTCATCGC CGCCCGCAAA CTCTATGGCG GGTCGATCAA CCAGTTCACC
CACGCATTCA AGAGCTTTGG CTGGAACGTG GCGTGGGCCG ATCCGGACGA CGTCGAAACG
TTCGAGCAAG CGGTCACGCC GCGAACACGG GCGATCTTCA TCGAATCCAT CGCCAATCCG
AGAGGATCGA TCACCGATAT CGAAGCCGTC GCCGCCGTCG CGCGCAAGGC CGGTGTTCCC
TTGATCGTCG ATAATACCAT GGCGAGCCCC TACCTGATCC GGCCGATCGA ACATGGCGCC
GATATCGTGG TTCAGTCGCT GACAAAGTTC CTCGCCGGCC ACGGCAACTC GCTCGGCGGC
ATCATCGTCG ATGCAGGCAC GTTCGACTGG TCGAGGGACA ACAAGTATCC GATGCTGAGC
GAGCCGCGTC CGGAATATCA CGGCATCAAG CTGCAGGAGA CGTTCGGCAA CTTCGCGTTC
GCGATTGCCT GCCGCGTGCT GGGCCTGCGC GATCTCGGCC CGGCGCTGTC GCCGTTCAAC
GCTTTCATGA TCCTGACCGG CATCGAAACG CTACCGTTGC GGATGCAGAA GCATTGCGAG
AATTCCCAGG CGATCGCCGA ATGGTTGGCC AGCCACCCCA AGGTCGCGGC CGTCAACTAC
GCCGGATTGC CCGGCGACAA GTACAACAAG CTCGCCCGCA AATACACGCC GAAGGGCGCT
GGCGCCGTGT TCACGTTTAG CCTGAAGGGC GGATATGACG CCGGCGTCAA TCTGGTGTCG
AAACTCAAGT TATTCTCGCA TCTCGCCAAC GTTGGCGATA CCCGCTCGCT CGTGATTCAC
CCTGCATCGA CCACGCATAG CCAGCTCGAC GACGACGCCA AGACCAGAGC CGGCGCCGGA
CCCGACATCG TCCGCCTGTC GATCGGCATC GAGGACAAGG AGGATCTGAT GGCCGACCTC
GATCAGGCCA TGACCTAG
 
Protein sequence
MTDRIPGFAT LAVHAGAQPD PTTGARTTPI YQTTSFVFND ADHAASLFGL QSFGNIYTRI 
GNPTNAVLEE RVAALEGGTA ALAVASGHAA QVVTLQQLLK PGDEVIAARK LYGGSINQFT
HAFKSFGWNV AWADPDDVET FEQAVTPRTR AIFIESIANP RGSITDIEAV AAVARKAGVP
LIVDNTMASP YLIRPIEHGA DIVVQSLTKF LAGHGNSLGG IIVDAGTFDW SRDNKYPMLS
EPRPEYHGIK LQETFGNFAF AIACRVLGLR DLGPALSPFN AFMILTGIET LPLRMQKHCE
NSQAIAEWLA SHPKVAAVNY AGLPGDKYNK LARKYTPKGA GAVFTFSLKG GYDAGVNLVS
KLKLFSHLAN VGDTRSLVIH PASTTHSQLD DDAKTRAGAG PDIVRLSIGI EDKEDLMADL
DQAMT