Gene Nham_2454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2454 
SymbolrpsI 
ID4029288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2714713 
End bp2715189 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content64% 
IMG OID637970913 
Product30S ribosomal protein S9 
Protein accessionYP_577704 
Protein GI92117975 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.812734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGATA CCATGCAGTC TCTCGACCAG TTGTCCGCGC TGAAGACCGC CGAGTCAGAA 
GCGCCGAAGC ACACCAAGAA AATCGACAAG TACGGCCGCG CCTACGCCAC CGGCAAGCGC
AAGGACGCGG TTGCCCGCGT CTGGATCAAG CCGGGCGCCG GCAAGATTCT CGTCAATGCC
CGCGAGGTCG AAGTTTACTT TGCGCGCCCG GTGCTGCGAA TGATGATCCA GCAACCGCTC
GTTGCCGCGG CGCGCGCCGG TCAGTACGAC GTGGTGTGCA CCGTCGCCGG CGGCGGCTTG
TCCGGTCAGG CTGGGGCCGT GCGTCACGGC CTGTCCAAGG CGTTGACGAA CTTCGAACCC
GAATTGCGCG GCGTTCTCAA GAAGGGCGGC TTCCTGACCC GCGATTCCCG AGTGGTCGAG
CGCAAGAAGT ACGGCAAGGC GAAAGCCCGC CGCTCGTTCC AGTTCTCCAA GCGCTAA
 
Protein sequence
MSDTMQSLDQ LSALKTAESE APKHTKKIDK YGRAYATGKR KDAVARVWIK PGAGKILVNA 
REVEVYFARP VLRMMIQQPL VAAARAGQYD VVCTVAGGGL SGQAGAVRHG LSKALTNFEP
ELRGVLKKGG FLTRDSRVVE RKKYGKAKAR RSFQFSKR